# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1p9qC	256	22.62	a.5.8.1,d.235.1.2,d.58.11.3	104093,104094,104095
1p3wA	404	25.80	c.67.1.3	87752
2h30A	164	28.81		
1wdcB	156	30.95	a.39.1.5	17302
1i8oA	114	39.53	a.3.1.1	61979
2gv5A	161	41.33		
1t95A	240	47.83	a.5.8.1,d.235.1.2,d.58.11.3	106705,106706,106707
1ijqA	316	51.73	b.68.5.1,g.3.11.1	62506,62507
2oucA	142	55.87		
2raqA	97	61.26		
1wdcC	156	61.45	a.39.1.5	17317
2b1kA	168	62.14		
1jdlA	121	65.17	a.3.1.1	66557
1svjA	156	66.63	d.220.1.1	106049
2i5tA	188	68.13		
2g2kA	170	70.11		
1xe7A	203	70.27	b.82.1.16	115213
2o8iA	165	74.62		
2gmgA	105	76.33		
2pefA	373	78.42		
2ebbA	101	80.17		
1gp1A	198	80.31	c.47.1.10	33059
2zbtA	297	80.67		
2hyxA	352	81.35		
1t6sA	162	89.48	a.4.5.60,a.4.5.60	112271,112272