# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1p3wA	404	5.573	c.67.1.3	87752
2gmgA	105	29.29		
1wdcB	156	33.93	a.39.1.5	17302
2zbtA	297	41.29		
2i5tA	188	42.85		
2o8iA	165	45.70		
1jdlA	121	49.12	a.3.1.1	66557
2z69A	154	51.31		
1i8oA	114	51.82	a.3.1.1	61979
2raqA	97	56.05		
1wdcC	156	56.72	a.39.1.5	17317
2g2kA	170	60.14		
1kmkA	406	69.46	c.67.1.3	68696
1aua	296	70.93		
2oucA	142	71.31		
1t3iA	420	72.56	c.67.1.3	106354
2qr6A	393	72.78		
2gvhA	288	75.66	d.38.1.1,d.38.1.1	135776,135777
2scpA	174	75.90	a.39.1.5	17256
1s6yA	450	77.44	c.2.1.5,d.162.1.2	105314,105315
1p9qC	256	78.89	a.5.8.1,d.235.1.2,d.58.11.3	104093,104094,104095
2h30A	164	79.90		
1auaA	296	85.00	a.5.3.1,c.13.1.1	16290,30882