Best Alignments for T0465

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ovkC	3.1222e+01	2ovkC/T0465-2ovkC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sxjC	3.1805e+01	1sxjC/T0465-1sxjC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.80.1.1 c.37.1.20
1br1B	3.2931e+01	1br1B/T0465-1br1B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
2qacA	3.3282e+01	2qacA/T0465-2qacA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1f0nA	3.6516e+01	1f0nA/T0465-1f0nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.3
2pibA	4.0199e+01	2pibA/T0465-2pibA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gv5A	4.8009e+01	2gv5A/T0465-2gv5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ywnA	4.9600e+01	2ywnA/T0465-2ywnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o5gA	5.4137e+01	2o5gA/T0465-2o5gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1st9A	5.4306e+01	1st9A/T0465-1st9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.10
2z69A	5.4702e+01	2z69A/T0465-2z69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wdcC	5.5369e+01	1wdcC/T0465-1wdcC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
1tggA	5.6504e+01	1tggA/T0465-1tggA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yqfA	5.6884e+01	1yqfA/T0465-1yqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2raqA	5.8294e+01	2raqA/T0465-2raqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yzhA	5.9749e+01	2yzhA/T0465-2yzhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kpsB	5.9833e+01	1kpsB/T0465-1kpsB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xiyA	6.0469e+01	1xiyA/T0465-1xiyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.10
1izoA	6.0842e+01	1izoA/T0465-1izoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.104.1.1
1svjA	6.1828e+01	1svjA/T0465-1svjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.220.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001