# List of top-scoring protein chains for t04-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1sxjC	340	3.665	a.80.1.1,c.37.1.20	106085,106086
1f0nA	285	13.10	c.69.1.3	34636
1svjA	156	17.83	d.220.1.1	106049
2pibA	216	18.69		
2ovkC	159	25.37		
2raqA	97	28.80		
2z69A	154	31.35		
1rypC	244	36.37	d.153.1.4	41934
2qacA	146	36.98		
2zbtA	297	41.43		
3c85A	183	46.55		
1pv1A	299	47.62	c.69.1.34	111639
2o8iA	165	48.09		
2gv5A	161	55.69		
1xuvA	178	55.92	d.129.3.5	116069
1w7jB	151	65.81	a.39.1.5	120690
1ep3A	311	67.94	c.1.4.1	28597
1izoA	417	68.14	a.104.1.1	83851
1xknA	355	69.29	d.126.1.6	115414
2qeeA	437	71.44		
2z99A	219	72.44		
2o5gA	148	72.64		
2vqeM	126	75.89		
1njgA	250	76.40	c.37.1.20	85785
1gdvA	85	78.35	a.3.1.1	60458
1uddA	226	79.00	a.132.1.3	107776
2f3yA	148	85.02		
1u7eB	154	89.53