# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1sxjC	340	5.757	a.80.1.1,c.37.1.20	106085,106086
2z69A	154	24.93		
1f0nA	285	26.19	c.69.1.3	34636
2ovkC	159	35.67		
1svjA	156	38.41	d.220.1.1	106049
2o8iA	165	39.32		
1w7jB	151	39.71	a.39.1.5	120690
1izoA	417	43.68	a.104.1.1	83851
1rypC	244	44.33	d.153.1.4	41934
2pibA	216	47.95		
1br1B	150	48.19	a.39.1.5	17309
2zbtA	297	61.08		
2fnaA	357	61.81	a.4.5.11,c.37.1.20	133809,133810
2v8oA	444	62.87		
2zfdA	226	65.69		
2qacA	146	67.80		
1xuvA	178	68.72	d.129.3.5	116069
2qeeA	437	71.66		
2gv5A	161	72.34		
2fywA	267	74.02	c.135.1.1	134408
1pv1A	299	75.55	c.69.1.34	111639
2ahxA	617	77.06		
2yxtA	312	77.81		
2raqA	97	81.96		
1q77A	138	88.39	c.26.2.4	96023