# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2qacA	146	2.545		
2gv5A	161	10.32		
2obhA	143	14.19		
2i7hA	189	14.58		
2o5gA	148	19.53		
2a7oA	112	37.53		
1wb4A	297	45.60	c.69.1.2	120827
1rroA	108	46.54	a.39.1.4	17195
4cpvA	108	51.34	a.39.1.4	17198
2z69A	154	51.63		
169lA	164	51.71	d.2.1.3	36963
3c85A	183	54.43		
2o8iA	165	54.85		
1xkpB	124	58.52	d.198.1.1	122087
2bl0B	145	60.66		
1a2xA	159	61.71	a.39.1.5	17251
2nteA	210	62.48		
2cvjA	180	63.91		
2g7jA	124	66.09		
2gqbA	130	66.11		
1plcA	99	66.61	b.6.1.1	22846
2afcA	168	69.47	c.50.1.2	126676
2raqA	97	70.61		
1n08A	163	71.07	b.43.5.1	79730
1a53	247	75.77		
2hiyA	183	76.73		
2fnaA	357	80.06	a.4.5.11,c.37.1.20	133809,133810
1pv1A	299	82.22	c.69.1.34	111639
174lA	164	84.13	d.2.1.3	36956
1vplA	256	85.25	c.37.1.12	113966