# List of top-scoring protein chains for T0464.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jnyA	67	3.19e-06		
2pk7A	69	3.02e-05		
2hf1A	68	0.000347		
2js4A	70	0.000818		
2jr6A	68	0.01188		
2jwyA	168	6.585		
1v6tA	255	18.27	c.6.2.5	113550
2j6aA	141	23.73		
4gpd1	333	32.84		
2co5A	99	40.90		
2oxnA	340	57.79		
1y65A	342	57.83	c.1.8.7	116495
1tr9A	341	57.85	c.1.8.7	112617
2a2lA	145	62.83	d.110.9.1	126035
1uucA	55	71.48	g.68.1.2	108045
1z1aA	142	84.03	d.339.1.1	124344
1zhiB	138	84.08	d.339.1.1	125097
2pnfA	248	85.93