# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	7.79e-05		
2j6aA	141	0.2836		
3ovoA	56	6.372	g.68.1.1	44696
1sgpI	51	13.31	g.68.1.1	44678
1r0rI	51	17.60	g.68.1.1	96736
2ch9A	131	18.99		
2ioyA	283	19.86		
1obfO	335	22.02	c.2.1.3,d.81.1.1	86768,86769
1t1jA	125	22.84	c.23.14.2	106249
2gbwA	454	29.11		
3sgbI	56	33.59	g.68.1.1	44679
1ypvA	313	34.26		
8abp	306	35.66		
1qhuA	460	39.66	b.66.1.1,b.66.1.1	27530,27531
1w9yA	319	50.94	b.82.2.1	120801
1l4zB	136	54.85	d.15.5.1	77704
1k3tA	359	54.99	c.2.1.3,d.81.1.1	72022,72023
2fn9A	290	56.47		
1p3dA	475	58.17	c.5.1.1,c.59.1.1,c.72.2.1	87728,87729,87730
2pkhA	148	59.61		
2oggA	152	62.69		
1wmiA	90	63.99	d.298.1.2	121045
1vm9A	111	65.39	b.33.1.1	108886
1n9lA	109	68.97	d.110.3.6	85468
1gudA	288	69.38	c.93.1.1	83326
1v6tA	255	74.38	c.6.2.5	113550
1crwG	333	75.35	c.2.1.3,d.81.1.1	30026,39941
3cvoA	202	75.89		
1e1aA	314	76.31	b.68.6.1	59155
2occJ	59	81.20	f.23.4.1	43524
3bz6A	183	83.26