# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	6.34e-05		
2j6aA	141	0.3051		
3ovoA	56	4.896	g.68.1.1	44696
2ch9A	131	9.551		
1sgpI	51	11.24	g.68.1.1	44678
1r0rI	51	13.88	g.68.1.1	96736
2ioyA	283	14.47		
1obfO	335	16.00	c.2.1.3,d.81.1.1	86768,86769
1t1jA	125	17.92	c.23.14.2	106249
8abp	306	23.42		
1qhuA	460	24.99	b.66.1.1,b.66.1.1	27530,27531
1ypvA	313	28.40		
3sgbI	56	29.16	g.68.1.1	44679
1p3dA	475	36.89	c.5.1.1,c.59.1.1,c.72.2.1	87728,87729,87730
1k3tA	359	40.16	c.2.1.3,d.81.1.1	72022,72023
1w9yA	319	42.28	b.82.2.1	120801
2fn9A	290	43.71		
3cvoA	202	49.29		
1l4zB	136	52.67	d.15.5.1	77704
1gudA	288	53.46	c.93.1.1	83326
2vofA	157	62.32		
1crwG	333	64.14	c.2.1.3,d.81.1.1	30026,39941
1ynpA	317	68.88		
1yliA	153	75.09	d.38.1.1	123651
2pkhA	148	75.93		
2occJ	59	79.78	f.23.4.1	43524
1e1aA	314	86.68	b.68.6.1	59155
1n9lA	109	86.87	d.110.3.6	85468
1wmiA	90	89.88	d.298.1.2	121045