# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	7.18e-05		
2j6aA	141	0.3252		
3ovoA	56	5.206	g.68.1.1	44696
1sgpI	51	12.11	g.68.1.1	44678
2ch9A	131	12.98		
1r0rI	51	17.11	g.68.1.1	96736
1qhuA	460	20.57	b.66.1.1,b.66.1.1	27530,27531
1obfO	335	21.15	c.2.1.3,d.81.1.1	86768,86769
1ypvA	313	23.49		
3sgbI	56	28.25	g.68.1.1	44679
1l4zB	136	29.41	d.15.5.1	77704
2pkhA	148	34.70		
1t1jA	125	36.71	c.23.14.2	106249
1k3tA	359	43.79	c.2.1.3,d.81.1.1	72022,72023
8abp	306	47.35		
2ioyA	283	59.14		
1crwG	333	60.96	c.2.1.3,d.81.1.1	30026,39941
1wbhA	214	63.75	c.1.10.1	120845
2pjhA	80	64.72		
2qgqA	304	69.44		
2gbwA	454	71.03		
2jepA	395	77.68		
2oggA	152	81.65		
3bz6A	183	84.09		
2occJ	59	84.30	f.23.4.1	43524
1cdzA	96	88.51	c.15.1.1	30925