# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	0.03874		
2j6aA	141	0.7432		
1ne9A	335	7.191	d.108.1.4,d.108.1.4	91839,91840
2c34A	116	14.40	b.1.26.1	129710
1l4dB	122	18.85	d.15.5.1	77684
1k7jA	206	25.69	d.115.1.1	72103
2v9dA	343	30.01		
2fvyA	309	35.19	c.93.1.1	134227
1lvaA	258	41.82	a.4.5.35,a.4.5.35,a.4.5.35,a.4.5.35	74276,74277,74278,74279
2vhsA	217	47.63		
1tjyA	316	49.92	c.93.1.1	107062
1rh6A	55	51.81	a.6.1.7	104935
2og5A	357	54.31		
2pvfA	334	55.91		
2a6sA	84	55.97	d.298.1.1	126305
2ab5A	269	56.99		
1u1sA	82	60.29	b.38.1.2	119451
1ypvA	313	64.26		
3c7jA	237	64.47		
2gfgA	193	66.26		
1lkoA	191	74.68	a.25.1.1,g.41.5.1	78063,78064
2zb9A	214	75.99		
3ca7A	52	77.98		
1xiwB	79	79.48	b.1.1.4	115368
2co5A	99	81.42		
1tgsI	56	82.12	g.68.1.1	44706
1pb6A	212	84.18	a.4.1.9,a.121.1.1	88017,88018
2nteA	210	84.99