# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	0.02320		
2j6aA	141	0.6083		
1ne9A	335	3.762	d.108.1.4,d.108.1.4	91839,91840
2c34A	116	11.18	b.1.26.1	129710
1k7jA	206	12.16	d.115.1.1	72103
2co5A	99	25.39		
2fvyA	309	30.67	c.93.1.1	134227
1tjyA	316	32.05	c.93.1.1	107062
1l4dB	122	35.32	d.15.5.1	77684
2a6sA	84	38.04	d.298.1.1	126305
2og5A	357	40.09		
2v9dA	343	40.49		
2couA	109	41.32		
2vhsA	217	53.85		
2gfgA	193	55.25		
2fn9A	290	55.29		
2nteA	210	58.99		
2d1lA	253	65.42		
2qu7A	288	68.02		
1ypvA	313	69.96		
2pvfA	334	70.65		
1tgsI	56	72.11	g.68.1.1	44706
3b7nA	320	72.60		
2dqrA	122	76.63		
2h3hA	313	76.87		
1lvaA	258	78.07	a.4.5.35,a.4.5.35,a.4.5.35,a.4.5.35	74276,74277,74278,74279
1rh6A	55	82.14	a.6.1.7	104935
1wbhA	214	89.68	c.1.10.1	120845