# List of top-scoring protein chains for t06-80-60-80-str2+near-backbone-11-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	0.4130		
1si2A	149	3.529	b.34.14.1	105569
1uliB	187	4.092	d.17.4.4	107923
1yreA	197	11.53	d.108.1.1	123919
2pd8A	149	20.43		
2pdrA	149	26.89		
1vkbA	161	28.30	d.269.1.1	108643
1k6dA	220	30.45	c.124.1.2	72082
1xeeA	91	30.87		
1h3fA	432	33.90	c.26.1.1,d.66.1.4	76631,76632
2v2fF	390	35.37		
2cx1A	187	39.18	b.122.1.1,d.17.6.4	130967,130968
2jv2A	83	39.81		
2z10A	194	41.48		
1yvcA	70	44.01	b.40.4.12	124094
2axtC	473	44.85		
1dm9A	133	46.10	d.66.1.3	39560
1cc8A	73	49.00	d.58.17.1	39343
2dxaA	166	49.03		
1u6lA	149	49.82	d.32.1.7	113067
2gj3A	120	49.95		
1repC	251	52.50	a.4.5.10,a.4.5.10	16125,16126
2jhmF	218	53.41		
2e55A	208	54.37		
2j6aA	141	55.00		
2gbwB	174	57.31		
2p38A	166	58.50		
3b84A	119	58.97		
2fldA	165	59.41		
1lla	628	64.38		
2vqeM	126	66.22		
1yj7A	171	66.30		
2g8mA	264	67.48		
2inpL	89	73.07		
2culA	232	75.60	c.3.1.7	130813
2c5wB	385	76.88	e.3.1.1	129958
1vgjA	184	79.92		
2jmsA	63	79.98		
1gwyA	175	81.37	b.97.1.1	83356
1y9aA	360	81.79		
2z0xA	158	83.57		
2fclA	169	87.80	d.218.1.11	133273