# List of top-scoring protein chains for T0464.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jnyA	67	0.000848		
2pk7A	69	0.004210		
2js4A	70	0.3481		
2hf1A	68	0.3534		
2jr6A	68	1.532		
2jwyA	168	5.397		
2a2lA	145	19.64	d.110.9.1	126035
2co5A	99	20.31		
4gpd1	333	31.63		
2go2A	163	41.82		
1nq6A	302	46.54	c.1.8.3	92046
1vbpA	149	52.27	b.77.3.1	108487
1vboA	149	52.27	b.77.3.1	108479
1j4tA	149	52.27	b.77.3.1	71515
1vs5S	92	53.13		
1v6tA	255	56.84	c.6.2.5	113550
2gy9S	87	58.15		
2qalS	91	59.91		
2vd6A	503	73.27		
2j91A	503	74.12		
3brsA	289	74.92		
2vjtA	161	78.02		
1z1aA	142	80.05	d.339.1.1	124344
1zhiB	138	80.51	d.339.1.1	125097
2curA	69	85.42	g.39.1.3,g.39.1.3	130820,130821
1ps6A	328	85.85	c.77.1.3	95070
1ptmA	329	85.92	c.77.1.3	95104