This file specifies which residues will be varied Column 2: Chain Column 4-7: sequential residue number Column 9-12: pdb residue number Column 14-18: id (described below) Column 21-40: amino acids to be used NATAA => use native amino acid ALLAA => all amino acids NATRO => native amino acid and rotamer PIKAA => select inividual amino acids POLAR => polar amino acids APOLA => apolar amino acids The following demo lines are in the proper format A 1 3 NATAA A 2 4 ALLAA A 3 6 NATRO A 4 7 NATAA B 5 1 PIKAA DFLM B 6 2 PIKAA HIL B 7 3 POLAR ------------------------------------------------- start A 1 1 NATAA M A 2 2 NATAA D A 3 3 NATAA R A 4 4 NATAA K A 5 5 NATAA L A 6 6 NATAA L A 7 7 NATAA H A 8 8 NATAA L A 9 9 NATAA L A 10 10 NATRO C A 11 11 NATAA S A 12 12 NATRO P A 13 13 NATAA D A 14 14 NATAA T A 15 15 NATAA R A 16 16 NATAA Q A 17 17 NATRO P A 18 18 NATAA L A 19 19 NATAA S A 20 20 NATAA L A 21 21 NATAA L A 22 22 NATAA E A 23 23 NATAA S A 24 24 NATAA K A 25 25 NATAA G A 26 26 NATAA L A 27 27 NATAA E A 28 28 NATAA A A 29 29 NATAA L A 30 30 NATAA N A 31 31 NATAA K A 32 32 NATAA A A 33 33 NATAA I A 34 34 NATAA A A 35 35 NATAA S A 36 36 NATAA G A 37 37 NATAA T A 38 38 NATAA V A 39 39 NATAA Q A 40 40 NATAA R A 41 41 NATAA A A 42 42 NATAA D A 43 43 NATAA G A 44 44 NATAA S A 45 45 NATAA I A 46 46 NATAA Q A 47 47 NATAA N A 48 48 NATAA Q A 49 49 NATAA S A 50 50 NATAA L A 51 51 NATAA H A 52 52 NATAA E A 53 53 NATAA A A 54 54 NATAA L A 55 55 NATAA I A 56 56 NATAA T A 57 57 NATAA R A 58 58 NATAA D A 59 59 NATAA R A 60 60 NATAA K A 61 61 NATAA Q A 62 62 NATAA V A 63 63 NATAA F A 64 64 NATAA R A 65 65 NATAA I A 66 66 NATAA E A 67 67 NATAA D A 68 68 NATAA S A 69 69 NATAA I A 70 70 NATRO P A 71 71 NATAA V A 72 72 NATAA L A 73 73 NATAA L A 74 74 NATRO P A 75 75 NATAA E A 76 76 NATAA E A 77 77 NATAA A A 78 78 NATAA I A 79 79 NATAA A A 80 80 NATAA T A 81 81 NATAA I A 82 82 NATAA Q A 83 83 NATAA I A 84 84 NATAA A A 85 85 NATAA N A 86 86 NATAA F A 87 87 NATRO P A 88 88 NATAA D A 89 89 NATAA K