Best Alignments for T0462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	1.4820e-11	2h3jA/T0462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	2.0172e-11	2gcxA/T0462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	1.1065e-04	1fx7A/T0462-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtrA	1.8409e-04	2dtrA/T0462-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1qw1A	5.2697e-04	1qw1A/T0462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qq9A	1.1213e-03	2qq9A/T0462-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udxA	4.7211e-01	1udxA/T0462-1udxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8 d.242.1.1
2dtr	4.8802e-01	2dtr/T0462-2dtr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e87A	5.6431e-01	2e87A/T0462-2e87A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ni3A	6.7195e-01	1ni3A/T0462-1ni3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.15.10.2
2dbyA	8.3850e-01	2dbyA/T0462-2dbyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pujA	9.1232e-01	1pujA/T0462-1pujA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1wf3A	2.3786e+00	1wf3A/T0462-1wf3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.52.3.1
2cxxA	2.4083e+00	2cxxA/T0462-2cxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1bymA	3.4421e+00	1bymA/T0462-1bymA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
2qu8A	3.8557e+00	2qu8A/T0462-2qu8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gj8A	4.0071e+00	2gj8A/T0462-2gj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1lnzA	4.3366e+00	1lnzA/T0462-1lnzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8
1h65A	4.8633e+00	1h65A/T0462-1h65A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2qptA	6.8812e+00	2qptA/T0462-2qptA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001