Best Alignments for T0462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2gcxA	8.5763e-12	2gcxA/T0462-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h3jA	9.6017e-12	2h3jA/T0462-2h3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	2.1758e-05	1fx7A/T0462-1fx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	2.1043e-04	2qq9A/T0462-2qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	4.6738e-04	2dtr/T0462-2dtr-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	6.8034e-04	2dtrA/T0462-2dtrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1bi0	1.2101e-03	1bi0/T0462-1bi0-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qu8A	2.5042e-03	2qu8A/T0462-2qu8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	2.9483e-03	1qw1A/T0462-1qw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e87A	5.0067e-03	2e87A/T0462-2e87A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udxA	7.9504e-03	1udxA/T0462-1udxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8 d.242.1.1
1lnzA	1.9770e-02	1lnzA/T0462-1lnzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8
1pujA	3.5020e-02	1pujA/T0462-1pujA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1wf3A	4.3538e-02	1wf3A/T0462-1wf3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.52.3.1
2cxxA	5.9779e-02	2cxxA/T0462-2cxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1ni3A	1.2429e-01	1ni3A/T0462-1ni3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.15.10.2
2gj8A	1.2561e-01	2gj8A/T0462-2gj8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1tq4A	1.4129e-01	1tq4A/T0462-1tq4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1bymA	1.6908e-01	1bymA/T0462-1bymA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
2dbyA	2.1558e-01	2dbyA/T0462-2dbyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001