Best Alignments for T0462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2gcxA	3.0760e-11	2gcxA/T0462-2gcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h3jA	3.8246e-11	2h3jA/T0462-2h3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	2.1011e-05	1fx7A/T0462-1fx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtrA	2.0928e-04	2dtrA/T0462-2dtrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	3.0299e-04	2qq9A/T0462-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	1.9386e-03	1qw1A/T0462-1qw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	2.0790e-02	2dtr/T0462-2dtr-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udxA	1.4017e-01	1udxA/T0462-1udxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8 d.242.1.1
1bymA	1.5964e-01	1bymA/T0462-1bymA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1ni3A	5.5629e-01	1ni3A/T0462-1ni3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.15.10.2
2cxxA	6.1556e-01	2cxxA/T0462-2cxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1wf3A	7.6272e-01	1wf3A/T0462-1wf3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.52.3.1
2qptA	9.6090e-01	2qptA/T0462-2qptA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pujA	1.0726e+00	1pujA/T0462-1pujA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1lnzA	1.1002e+00	1lnzA/T0462-1lnzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8
2dbyA	1.4560e+00	2dbyA/T0462-2dbyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gj8A	1.6469e+00	2gj8A/T0462-2gj8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2e87A	2.4441e+00	2e87A/T0462-2e87A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h65A	3.7415e+00	1h65A/T0462-1h65A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2b8wA	5.5553e+00	2b8wA/T0462-2b8wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001