Best Alignments for T0462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	1.4150e-10	2h3jA/T0462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	1.6657e-10	2gcxA/T0462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	6.8302e-04	1fx7A/T0462-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1qw1A	1.8235e-03	1qw1A/T0462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	3.1996e-03	2dtrA/T0462-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	9.5961e-03	2qq9A/T0462-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	1.2488e+00	2dtr/T0462-2dtr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	8.5162e+00	1bymA/T0462-1bymA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1bi0	2.1541e+01	1bi0/T0462-1bi0-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhs	2.4061e+01	1rhs/T0462-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	2.4332e+01	1rhsA/T0462-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1y8xB	2.5278e+01	1y8xB/T0462-1y8xB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h75A	3.4048e+01	1h75A/T0462-1h75A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
1uarA	3.5092e+01	1uarA/T0462-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1e0cA	3.6329e+01	1e0cA/T0462-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2c81A	4.3510e+01	2c81A/T0462-2c81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j48A	4.3517e+01	1j48A/T0462-1j48A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.7.1
1cbfA	5.1513e+01	1cbfA/T0462-1cbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1va0A	5.1875e+01	1va0A/T0462-1va0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1o69A	5.6216e+01	1o69A/T0462-1o69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001