Best Alignments for T0462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1ppjB	1.7707e+01	1ppjB/T0462-1ppjB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1a0tP	2.0958e+01	1a0tP/T0462-1a0tP-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.2
2z2nA	2.3791e+01	2z2nA/T0462-2z2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fcrA	2.8591e+01	2fcrA/T0462-2fcrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.5.1
1lfcA	2.9494e+01	1lfcA/T0462-1lfcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.3.1.5
1pmjX	3.1109e+01	1pmjX/T0462-1pmjX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
2gcxA	3.3353e+01	2gcxA/T0462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cfbA	3.3955e+01	1cfbA/T0462-1cfbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
2h3jA	3.5902e+01	2h3jA/T0462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q2bA	3.6967e+01	1q2bA/T0462-1q2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.10
1d9cA	4.1972e+01	1d9cA/T0462-1d9cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.26.1.3
1q7fA	4.6753e+01	1q7fA/T0462-1q7fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.9.1
1pmhX	4.8844e+01	1pmhX/T0462-1pmhX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
2q9uA	5.1714e+01	2q9uA/T0462-2q9uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1oh4A	5.3615e+01	1oh4A/T0462-1oh4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
2p4oA	5.4498e+01	2p4oA/T0462-2p4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bhuA	5.5884e+01	1bhuA/T0462-1bhuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.11.1.3
1qw1A	5.7653e+01	1qw1A/T0462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m4vA	5.9379e+01	1m4vA/T0462-1m4vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.2.2 d.15.6.1
1bhpA	6.2233e+01	1bhpA/T0462-1bhpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.13.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001