Best Alignments for T0462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2gcxA	1.7868e+01	2gcxA/T0462-2gcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	2.0452e+01	1bymA/T0462-1bymA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1qw1A	2.3144e+01	1qw1A/T0462-1qw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ijqA	2.3230e+01	1ijqA/T0462-1ijqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.5.1 g.3.11.1
2h3jA	2.3851e+01	2h3jA/T0462-2h3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lfcA	2.6631e+01	1lfcA/T0462-1lfcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.3.1.5
1v10A	2.8456e+01	1v10A/T0462-1v10A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.6.1.3 b.6.1.3 b.6.1.3
2qq9A	3.0250e+01	2qq9A/T0462-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xsoA	4.4579e+01	1xsoA/T0462-1xsoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.8.1
1npeA	4.5652e+01	1npeA/T0462-1npeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.5.1
1f6fB	4.7036e+01	1f6fB/T0462-1f6fB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1rcf	4.9101e+01	1rcf/T0462-1rcf-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pmjX	5.7145e+01	1pmjX/T0462-1pmjX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1pmhX	5.7339e+01	1pmhX/T0462-1pmhX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1bhuA	6.1103e+01	1bhuA/T0462-1bhuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.11.1.3
2qpwA	6.1286e+01	2qpwA/T0462-2qpwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hbnB	6.2918e+01	1hbnB/T0462-1hbnB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.89.1.1 d.58.31.2
1oh4A	6.2922e+01	1oh4A/T0462-1oh4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
3hhrB	6.4888e+01	3hhrB/T0462-3hhrB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1bhpA	7.2011e+01	1bhpA/T0462-1bhpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.13.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001