# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2obaA	138	16.01		
1f5jA	199	20.54	b.29.1.11	24342
1y13A	181	25.68	d.96.1.2	116319
1h4gA	207	27.98	b.29.1.11	70863
1pvxA	194	31.52	b.29.1.11	24341
2jwiA	143	32.71		
2jzfA	143	33.19		
1h1aA	191	33.27	b.29.1.11	83450
2jzdA	129	47.66		
1fqvD	149	48.32	a.157.1.1,d.42.1.1	19263,38667
1zckA	154	56.88		
1fs1B	141	57.64	a.157.1.1,d.42.1.1	19252,38664
2dt9A	167	61.41		
1n2eA	300	65.07	c.26.1.4	85268
2hcrA	326	65.07		
2g64A	140	65.33	d.96.1.2	134694
1t01A	255	70.26	a.24.9.1,a.24.9.1	106188,106189
2vgdA	218	74.39		
1id3B	102	76.21	a.22.1.1	66113
1x3zB	72	78.42	a.189.1.1	121674
2gar	212	78.47		
1z2nX	324	80.93		
1dp4A	435	81.88	c.93.1.1	35710
2a84A	300	83.83	c.26.1.4	126389
1aoiB	87	84.59	a.22.1.1	16470
1i9aA	182	89.11	d.113.1.2	62082
2odtX	328	89.80