# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1zckA	154	25.39		
2obaA	138	31.06		
1x3zB	72	33.17	a.189.1.1	121674
1y13A	181	37.27	d.96.1.2	116319
2ictA	94	45.14		
1aoiB	87	51.33	a.22.1.1	16470
1u7pA	164	52.63	c.108.1.17	113095
1amy	403	54.60		
2jwiA	143	55.85		
1id3B	102	55.94	a.22.1.1	66113
2nqtA	352	57.91		
2vkjA	106	74.40		
1v9dA	340	74.53	a.207.1.1	100535
1f5jA	199	74.57	b.29.1.11	24342
1jmvA	141	77.35	c.26.2.4	66897
1t01A	255	78.17	a.24.9.1,a.24.9.1	106188,106189
2guyA	478	78.91	b.71.1.1,c.1.8.1	135754,135755
2dj6A	115	80.36		
2gar	212	81.24		
2hcrA	326	82.03		
3cecA	104	85.98		
1j0hA	588	89.01	b.1.18.2,b.71.1.1,c.1.8.1	77027,77028,77029
1w6vA	141	89.31	d.324.1.1	120674