# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2obaA	138	22.28		
1zckA	154	23.73		
1x3zB	72	24.74	a.189.1.1	121674
1fs1B	141	30.63	a.157.1.1,d.42.1.1	19252,38664
1amy	403	35.65		
1u7pA	164	36.51	c.108.1.17	113095
2jzfA	143	41.75		
1j0hA	588	42.05	b.1.18.2,b.71.1.1,c.1.8.1	77027,77028,77029
2jwiA	143	46.43		
1ht6A	405	47.20	b.71.1.1,c.1.8.1	83629,83630
2gar	212	50.00		
1jkxA	212	51.93	c.65.1.1	66813
1y13A	181	52.97	d.96.1.2	116319
1v9dA	340	54.81	a.207.1.1	100535
2guyA	478	55.66	b.71.1.1,c.1.8.1	135754,135755
1e43A	483	63.60	b.71.1.1,c.1.8.1	59217,59218
1t01A	255	63.78	a.24.9.1,a.24.9.1	106188,106189
1fqvD	149	64.91	a.157.1.1,d.42.1.1	19263,38667
1id3B	102	66.26	a.22.1.1	66113
1a66A	178	67.70	b.2.5.3	22441
1aoiB	87	70.11	a.22.1.1	16470
1dutA	133	70.87	b.85.4.1	28355
2hcrA	326	72.02		
2jzdA	129	72.13		
1ea9C	583	72.17	b.1.18.2,b.71.1.1,c.1.8.1	70087,70088,70089
1jmvA	141	73.78	c.26.2.4	66897
1mejA	223	80.12	c.65.1.1	79029
2ictA	94	81.51		
1meoA	209	84.27	c.65.1.1	79035
1h75A	81	86.21	c.47.1.1	60716
1f7dA	136	88.27	b.85.4.1	28353