# List of top-scoring protein chains for t06-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g64A	140	8.175	d.96.1.2	134694
1h3gA	601	17.97	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
2e67A	264	25.85		
2ictA	94	26.95		
1f5jA	199	29.34	b.29.1.11	24342
1tcvA	287	35.82		
1h4gA	207	38.80	b.29.1.11	70863
2qguA	211	39.20		
1v9tA	166	40.30	b.62.1.1	108451
3cecA	104	44.95		
2bmbA	545	51.94		
1v5xA	203	54.12	c.1.2.4	100377
2cwzA	141	54.34	d.38.1.7	130961
1lopA	164	56.35	b.62.1.1	27510
2dtjA	178	56.51		
1b66A	140	57.19	d.96.1.2	40657
1vkrA	125	67.04	c.44.2.1	108689
1j0hA	588	69.44	b.1.18.2,b.71.1.1,c.1.8.1	77027,77028,77029
2nn8A	138	74.70	b.29.1.3	138392
2a4vA	159	74.72	c.47.1.10	126163
1jkxA	212	75.46	c.65.1.1	66813
1p3wA	404	78.56	c.67.1.3	87752
1meoA	209	82.93	c.65.1.1	79035
2yzjA	169	85.47		
2dj6A	115	85.88		
1utyA	187	87.05	b.147.1.1	108036
1wnyA	186	88.71