# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g64A	140	6.402	d.96.1.2	134694
1h3gA	601	22.45	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
1h4gA	207	25.87	b.29.1.11	70863
3cecA	104	33.68		
1f5jA	199	33.97	b.29.1.11	24342
2e67A	264	38.20		
2ictA	94	41.31		
1utyA	187	42.27	b.147.1.1	108036
1p3wA	404	43.85	c.67.1.3	87752
1tcvA	287	45.98		
1b66A	140	53.11	d.96.1.2	40657
2dtjA	178	55.01		
2qguA	211	56.57		
2bmbA	545	60.47		
1vkrA	125	61.48	c.44.2.1	108689
1v9tA	166	61.66	b.62.1.1	108451
2yzjA	169	65.95		
1eg5A	384	66.64	c.67.1.3	34429
1tyjA	170	68.27	b.2.2.2	119390
2pt0A	340	70.19		
2a4vA	159	73.31	c.47.1.10	126163
1oksA	56	73.65	a.8.5.1	93271
2dj6A	115	75.46		
2vkjA	106	76.09		
1kmkA	406	76.54	c.67.1.3	68696
2nn8A	138	78.38	b.29.1.3	138392
1o22A	170	81.51	d.238.1.1	86557
1lopA	164	82.21	b.62.1.1	27510