# List of top-scoring protein chains for t06-w0.5-1-alpha-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g64A	140	7.205	d.96.1.2	134694
1h3gA	601	14.28	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
2e67A	264	24.49		
2ictA	94	26.10		
1tcvA	287	29.65		
1j0hA	588	37.00	b.1.18.2,b.71.1.1,c.1.8.1	77027,77028,77029
2gp5A	349	38.14		
1v5xA	203	41.48	c.1.2.4	100377
1utyA	187	43.67	b.147.1.1	108036
3cecA	104	47.76		
2dtjA	178	52.32		
2bmbA	545	53.94		
1jkxA	212	55.80	c.65.1.1	66813
1v9tA	166	56.91	b.62.1.1	108451
1vkrA	125	56.91	c.44.2.1	108689
1f5jA	199	61.85	b.29.1.11	24342
1h4gA	207	64.88	b.29.1.11	70863
1j77A	209	69.05	a.132.1.2	62674
1meoA	209	69.36	c.65.1.1	79035
1lopA	164	70.03	b.62.1.1	27510
1wnyA	186	72.90		
2qguA	211	73.00		
1b66A	140	77.21	d.96.1.2	40657
2pt0A	340	78.24		
2j4hA	193	78.41		
2a4vA	159	86.67	c.47.1.10	126163
2ftsA	419	88.24	b.85.6.1,b.103.1.1,c.57.1.2	134079,134080,134081
2r5kA	424	89.28