# List of top-scoring protein chains for t06-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g64A	140	16.38	d.96.1.2	134694
1j0hA	588	19.93	b.1.18.2,b.71.1.1,c.1.8.1	77027,77028,77029
1h4gA	207	25.96	b.29.1.11	70863
1j77A	209	31.40	a.132.1.2	62674
2cwzA	141	33.70	d.38.1.7	130961
2pt0A	340	35.49		
1f5jA	199	35.54	b.29.1.11	24342
1vkrA	125	36.38	c.44.2.1	108689
2ictA	94	38.40		
1fs1B	141	38.75	a.157.1.1,d.42.1.1	19252,38664
1bplB	294	48.94	b.71.1.1	27716
2obaA	138	53.50		
3cecA	104	54.42		
1h3gA	601	57.04	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
1wd6A	123	62.01	d.58.4.12	114525
2nn8A	138	62.34	b.29.1.3	138392
2hiqA	113	62.65	d.58.4.12	136529
2hyxA	352	65.22		
2fhzA	109	65.32	d.311.1.1	133505
2dsmA	72	65.90		
1h05A	146	77.81	c.23.13.1	76433
1ou0A	207	78.43	c.23.17.1	93536
1utyA	187	83.13	b.147.1.1	108036
1u34A	119	83.60	g.76.1.1	107634
2bgxA	261	83.79	a.20.1.1,d.118.1.1	128504,128505
2ftsA	419	84.54	b.85.6.1,b.103.1.1,c.57.1.2	134079,134080,134081
2nqrA	411	88.42	b.85.6.1,b.103.1.1,c.57.1.2	138490,138491,138492