Best Alignments for T0460

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1x3zB	8.8207e+00	1x3zB/T0460-1x3zB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.189.1.1
1bplB	2.2094e+01	1bplB/T0460-1bplB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.71.1.1
2ictA	3.5477e+01	2ictA/T0460-2ictA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g64A	3.7881e+01	2g64A/T0460-2g64A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.96.1.2
1u0jA	3.8594e+01	1u0jA/T0460-1u0jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.20
1thfD	4.2917e+01	1thfD/T0460-1thfD-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.1
1f5jA	4.3471e+01	1f5jA/T0460-1f5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.11
3cecA	4.3572e+01	3cecA/T0460-3cecA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pvxA	6.6095e+01	1pvxA/T0460-1pvxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.11
2c3gA	6.6517e+01	2c3gA/T0460-2c3gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fs1B	6.8487e+01	1fs1B/T0460-1fs1B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.157.1.1 d.42.1.1
1h4gA	6.8775e+01	1h4gA/T0460-1h4gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.11
3bc9A	7.3244e+01	3bc9A/T0460-3bc9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2flsA	7.3345e+01	2flsA/T0460-2flsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h1aA	7.3358e+01	1h1aA/T0460-1h1aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.11
1v32A	7.3697e+01	1v32A/T0460-1v32A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.42.1.1
1bli	7.4010e+01	1bli/T0460-1bli-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e67A	7.5520e+01	2e67A/T0460-2e67A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h75A	7.7594e+01	1h75A/T0460-1h75A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
1meoA	7.7600e+01	1meoA/T0460-1meoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.65.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001