Best Alignments for T0446

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3b77A	1.1917e-16	3b77A/T0446-3b77A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cayA	4.5189e-01	2cayA/T0446-2cayA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.12
2hthB	1.5034e+00	2hthB/T0446-2hthB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.12
1zsqA	1.7688e+01	1zsqA/T0446-1zsqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.8 c.45.1.3
2r19A	1.8730e+01	2r19A/T0446-2r19A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jr7A	5.1153e+01	1jr7A/T0446-1jr7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.3
1nx8A	5.2526e+01	1nx8A/T0446-1nx8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.8
3b8eG	5.8910e+01	3b8eG/T0446-3b8eG-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lw3A	6.4735e+01	1lw3A/T0446-1lw3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.8 c.45.1.3
2e85A	6.8664e+01	2e85A/T0446-2e85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1oihA	7.2267e+01	1oihA/T0446-1oihA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.5
2h7dA	7.5217e+01	2h7dA/T0446-2h7dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nysA	7.5342e+01	2nysA/T0446-2nysA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gclA	7.5935e+01	2gclA/T0446-2gclA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.10
2qazA	7.7234e+01	2qazA/T0446-2qazA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ktbA	8.9916e+01	1ktbA/T0446-1ktbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.71.1.1 c.1.8.1
1yvoA	8.9984e+01	1yvoA/T0446-1yvoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2yy3A	9.2819e+01	2yy3A/T0446-2yy3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i8lA	9.3066e+01	2i8lA/T0446-2i8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2imjA	9.5118e+01	2imjA/T0446-2imjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001