Best Alignments for T0446

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3b77A	8.8034e-20	3b77A/T0446-3b77A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hthB	4.6841e+00	2hthB/T0446-2hthB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.12
2cayA	5.4718e+00	2cayA/T0446-2cayA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.12
1p97A	4.1000e+01	1p97A/T0446-1p97A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.3.7
1p5tA	4.3188e+01	1p5tA/T0446-1p5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zyiA	5.3221e+01	1zyiA/T0446-1zyiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1klnA	5.3586e+01	1klnA/T0446-1klnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sa3A	5.5378e+01	1sa3A/T0446-1sa3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i8lA	5.8332e+01	2i8lA/T0446-2i8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2imjA	5.9545e+01	2imjA/T0446-2imjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x82A	6.1510e+01	1x82A/T0446-1x82A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.1.7
2qcvA	6.2447e+01	2qcvA/T0446-2qcvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a0iA	6.4497e+01	2a0iA/T0446-2a0iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e85A	6.5566e+01	2e85A/T0446-2e85A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ejeA	6.6183e+01	2ejeA/T0446-2ejeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2kfnA	7.0783e+01	2kfnA/T0446-2kfnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c5uA	7.1970e+01	2c5uA/T0446-2c5uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qxhA	7.2506e+01	1qxhA/T0446-1qxhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vn4A	7.3159e+01	2vn4A/T0446-2vn4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mjnA	7.4048e+01	1mjnA/T0446-1mjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001