# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b77A	193	3.83e-16		
2hthB	140	3.857	b.55.1.12	136743
2cayA	145	4.484	b.55.1.12	130167
1zyiA	171	20.52		
1x82A	190	24.85	b.82.1.7	114955
2ejeA	114	28.45		
1p97A	114	31.42	d.110.3.7	94382
2c5uA	375	36.40		
2vn4A	599	38.94		
2qcvA	332	59.14		
2hxdA	204	59.97		
5palA	109	61.24	a.39.1.4	17215
2v76A	107	62.38		
2bz6H	254	62.57	b.47.1.2	129552
4cpvA	108	62.74	a.39.1.4	17198
1pylA	97	65.66	d.1.1.2	104391
2ghsA	326	69.18	b.68.6.1	135209
1esrA	76	72.28	d.9.1.1	37427
1b8rA	108	73.88	a.39.1.4	17201
1b8lA	108	76.31	a.39.1.4	17199
1nar	290	82.15		
1dd8A	406	85.81	c.95.1.1,c.95.1.1	35932,35933
1xvjA	109	87.97		
1rwyA	109	88.41	a.39.1.4	98002