# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b77A	193	1.20e-13		
2cayA	145	0.9365	b.55.1.12	130167
2r19A	159	3.498		
1zsqA	528	13.71	b.55.1.8,c.45.1.3	125616,125617
4cpvA	108	26.96	a.39.1.4	17198
1x8bA	289	29.16		
1akyA	220	31.02	c.37.1.1,g.41.2.1	31896,45197
2bsqA	146	31.28	c.120.1.1	129098
1yvoA	172	32.81	d.108.1.1	124106
2q4kA	251	50.02	d.86.1.2	139864
2h1cA	139	50.32	c.120.1.1	135944
2h7dA	101	53.03		
1ktbA	405	55.89	b.71.1.1,c.1.8.1	72960,72961
1zirA	173	60.52	b.11.1.1,b.11.1.1	125126,125127
1pprM	312	61.12	a.131.1.1,a.131.1.1	19502,19503
1r0pA	312	62.09	d.144.1.7	96734
2djaA	84	66.15		
1qexA	288	68.39	b.32.1.1	24425
1jr7A	311	69.94	b.82.2.3	63255
1nx8A	273	70.47	b.82.2.8	86374
2oxgA	108	74.50		
2hthB	140	75.19	b.55.1.12	136743
1o7zA	77	77.79	d.9.1.1	86660
2rgxA	206	78.95		
1qf9A	194	79.04	c.37.1.1	31848
2bs2B	241	79.56	a.1.2.1,d.15.4.2	129033,129034
1rroA	108	83.99	a.39.1.4	17195
1jpaA	312	84.38	d.144.1.7	67011
3cu3A	172	85.48		
2gclA	261	88.10	b.55.1.10	134991