# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b77A	193	6.23e-15		
2cayA	145	0.4756	b.55.1.12	130167
2r19A	159	2.412		
1zsqA	528	7.885	b.55.1.8,c.45.1.3	125616,125617
2h7dA	101	19.27		
2bsqA	146	25.31	c.120.1.1	129098
1akyA	220	25.64	c.37.1.1,g.41.2.1	31896,45197
2pg0A	385	27.57		
2q4kA	251	33.09	d.86.1.2	139864
1yvoA	172	35.62	d.108.1.1	124106
2hthB	140	37.55	b.55.1.12	136743
1nx8A	273	38.91	b.82.2.8	86374
1o7zA	77	39.98	d.9.1.1	86660
1zirA	173	46.24	b.11.1.1,b.11.1.1	125126,125127
2h1cA	139	46.98	c.120.1.1	135944
1jr7A	311	47.86	b.82.2.3	63255
1ktbA	405	54.53	b.71.1.1,c.1.8.1	72960,72961
2djaA	84	57.13		
1qexA	288	57.42	b.32.1.1	24425
1v6zA	228	58.41	b.122.1.2,c.116.1.5	113551,113552
1otjA	283	58.76	b.82.2.5	93517
1oihA	301	58.77	b.82.2.5	93051
2gdnA	267	74.17		
1r6xA	395	76.89	b.122.1.3,c.26.1.5	97167,97168
2rgxA	206	77.21		
4cpvA	108	78.82	a.39.1.4	17198
1kptA	105	80.36	d.70.1.1	39588
1on0A	158	85.27	d.108.1.1	87095
1z4eA	153	87.03	d.108.1.1	124431
2oxgA	108	88.38