Best Alignments for T0446

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3b77A	1.5714e-15	3b77A/T0446-3b77A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cayA	2.5094e-01	2cayA/T0446-2cayA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.12
2hthB	5.1452e-01	2hthB/T0446-2hthB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.12
1lw3A	1.2199e+01	1lw3A/T0446-1lw3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.8 c.45.1.3
1zsqA	1.3149e+01	1zsqA/T0446-1zsqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.8 c.45.1.3
2r19A	1.4281e+01	2r19A/T0446-2r19A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jr7A	2.1159e+01	1jr7A/T0446-1jr7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.3
1nx8A	2.8458e+01	1nx8A/T0446-1nx8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.8
3b8eG	3.4669e+01	3b8eG/T0446-3b8eG-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gclA	3.9284e+01	2gclA/T0446-2gclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.10
1px5A	4.2632e+01	1px5A/T0446-1px5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.160.1.2 d.218.1.6
1oihA	5.1435e+01	1oihA/T0446-1oihA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.5
2e85A	5.6427e+01	2e85A/T0446-2e85A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xxqA	6.3121e+01	1xxqA/T0446-1xxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nysA	6.6115e+01	2nysA/T0446-2nysA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qazA	6.6195e+01	2qazA/T0446-2qazA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsxA	7.1579e+01	2fsxA/T0446-2fsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o6gA	7.1948e+01	1o6gA/T0446-1o6gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.1 c.69.1.4
1lniA	7.2721e+01	1lniA/T0446-1lniA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.1.1.2
2qu8A	7.2998e+01	2qu8A/T0446-2qu8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001