(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0443
              10        20        30               40        50        
              |         |         |                |         |        
   1 DIPDIHYSNDSKYTPSPAAFIRQYRYDVTHDLQ...E....AETALLIWRNAEDDVMYQTLDGFD
   2 -IPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLH...E....AETALLIWRNAEDDVMYQTLDGFD
   3 -IPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLH...E....AETALLIWRNAEDDVMYQTLDGFD
   4 -IPDIHYSNDSKYTPSPAAFIRQYRYDVTHDLQ...E....AETALLIWRNAEDDVMYQTLDGFD
   5 -IPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLH...E....AETALLIWRNAEDDVMYQTLDGFD
   6 -PTHFSWDADTLMQLSPVTYLKHYDVSFLKNQF...EqiisQPSYLIIWRNRKFDVYYQEISELD
   7 -ADPIAWDERTEMQLSPTAFLKSYDVDFLSSHFsql-ek..AASHIIVWRNRHFQVKQQKLSELD
   8 -TDPIAWDERTEMQLSPAAFLKSYDGDFLSSHFsql-ek..AASHIIVWRNRHFQVKQQKLSELD
   9 -PTEFDITEQTPMKCSEVCFIREYPVDFLSTQF...NqilnQPSKTIVWRNAQFEVYYQKLTDLD
  10 -PTEFDITEQTPMKCSEVCFIKEYPVDFLSTQF...NqilnQPSKTIVWRNAQFEVYYQKLTDLD


      60        70        80        90       100       110       120   
      |         |         |         |         |         |         |   
   1 MMLLEIMGSSALSFDTLAQTLVEFMPKADNWKNILLGKWSGWIEQRIIIPSLSAISENMEGNSPS
   2 MMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSGWTEQRIIIPSLSAISENMEGNSPG
   3 MMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSGWTEQRIIIPSLSAISENMEGNSPG
   4 MMLLEIMGSSALSFDTLAQTLVEFMPKADNWKNILLGKWSGWIEQRIIIPSLSAISENMEGNSPS
   5 MMLLEIMGFSALSFDTLAQTLVEFMPEDDNWKNILLGKWSGWTEQRIIIPSLSAISENMEDNSPG
   6 FYLLSCLQEQPLSLNQLMEELTQLLSVEQISIPLIQNIWQKWINAQVIFPS--------------
   7 FWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICP---------------
   8 FWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICP---------------
   9 HFLLMLLQEKAYSLQKLKESLKN-LAVDENILQFLQQTWYKWIDLGVIIPEQS------------
  10 HFLLMLLQEKAYSLQKLKESLKN-LAVDENILQFLQQTWYKWIDLGVIIPEQ-------------


            
           
   1 QNHLSA
   2 QNHLSA
   3 QNHLSA
   4 QNHLSA
   5 QNHLSA
   6 ------
   7 ------
   8 ------
   9 ------
  10 ------