# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ekfA	365	7.632	e.17.1.1	59445
2zc2A	78	22.97		
2imjA	166	29.84		
2cyyA	151	33.87	a.4.5.32,d.58.4.2	131028,131029
1tvlA	454	35.45	c.1.16.4	107366
2dbbA	151	35.64		
2zb9A	214	35.90		
2f2aB	483	37.47	a.182.1.2,d.128.1.5	132802,132803
2ivmA	150	40.36		
2ozbB	260	40.74		
2qz8A	149	48.56		
1ri7A	171	50.64	a.4.5.32,d.58.4.2	97504,97505
1o65A	246	56.78	b.58.1.2	92544
1r5tA	142	57.93	c.97.1.1	104812
1h5wA	309	58.07	e.27.1.1	65635
2o7oA	207	61.96	a.4.1.9,a.121.1.1	138930,138931
1whrA	124	62.78	d.68.7.1	114650
2p5yA	311	64.27		
2d5rA	252	69.45		
1mg4A	113	73.12	d.15.11.1	84953
2pzmA	330	75.22		
1nf3A	195	77.90	c.37.1.8	85594
1h54A	754	78.18	a.102.1.4,b.30.5.3	60634,60635
1uwzA	136	81.01	c.97.1.1	108081
2v6xA	85	83.02		
3bcgA	215	85.04		
1byqA	228	86.24	d.122.1.1	41100
1rzhL	281	87.38	f.26.1.1	98164