# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ekfA	365	3.920	e.17.1.1	59445
2ivmA	150	10.23		
2qz8A	149	10.42		
2cyyA	151	10.90	a.4.5.32,d.58.4.2	131028,131029
2dbbA	151	12.02		
2cg4A	152	13.57	a.4.5.32,d.58.4.2	130417,130418
2ozbB	260	16.23		
1ri7A	171	16.79	a.4.5.32,d.58.4.2	97504,97505
1i1gA	141	18.71	a.4.5.32,d.58.4.2	65982,65983
2cfxA	144	20.33	a.4.5.32,d.58.4.2	130395,130396
2ia0A	171	23.91		
2p5vA	162	25.00		
2f2aB	483	42.74	a.182.1.2,d.128.1.5	132802,132803
2o7oA	207	42.99	a.4.1.9,a.121.1.1	138930,138931
1h5wA	309	45.33	e.27.1.1	65635
2zb9A	214	45.43		
1tvlA	454	48.62	c.1.16.4	107366
2gqqA	163	50.67		
1uf2C	421	52.31	a.115.1.3,b.19.1.1	99291,99292
2cviA	83	54.50		
2imjA	166	55.69		
1h54A	754	56.49	a.102.1.4,b.30.5.3	60634,60635
2e7xA	150	58.60		
1o65A	246	61.73	b.58.1.2	92544
1whrA	124	65.66	d.68.7.1	114650
1u04A	771	67.53	b.34.14.1,c.55.3.10	107539,107540
1k8kB	394	68.63	c.55.1.1	68307
1o3uA	135	79.20	a.24.16.3	86615
1ea3A	164	80.25	a.95.1.1	59398
3bgaA	1010	83.09		
2guzA	71	83.83		
2qbvA	90	84.04		
2p5yA	311	84.06		
2pn6A	150	86.42