# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1b0uA	262	8.978	c.37.1.12	32370
1z2aA	168	15.00	c.37.1.8	124374
2ipiA	521	15.70		
3c9pA	123	28.19		
1ispA	181	29.66	c.69.1.18	76778
1heiA	451	33.56	c.37.1.14,c.37.1.14	32463,32464
2hy5B	136	33.65	c.114.1.1	136866
1rzuA	485	34.62	c.87.1.8	105140
2erxA	172	34.91	c.37.1.8	132304
1pujA	282	35.60	c.37.1.8	88294
1lrzA	426	36.35	a.2.7.4,d.108.1.4,d.108.1.4	78167,78168,78169
2gj8A	172	37.94	c.37.1.8	135270
1jpyA	137	44.51	g.17.1.6	67065
1f9mA	112	45.04	c.47.1.1	32736
2rf5A	258	45.83		
2qx5A	661	49.68		
1i2mA	216	52.12	c.37.1.8	61568
2r76A	152	54.69		
1xt8A	292	54.95	c.94.1.1	122293
2q3fA	181	67.42		
2z84A	218	68.20		
1mmqA	170	68.74	d.92.1.11	40396
1z4hA	66	69.36		
1wlxA	129	73.72		
2fwhA	134	75.83	c.47.1.1	134242
2px2A	269	76.22		
2g6bA	180	76.56	c.37.1.8	134701
3b7nA	320	77.43		
1qg4A	216	77.75	c.37.1.8	32035
2vjxA	846	84.60		
2fddA	100	89.45