Best Alignments for T0434

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2rfiA	9.1206e-34	2rfiA/T0434-2rfiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o8jA	1.5445e-33	2o8jA/T0434-2o8jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igqA	6.1922e-33	2igqA/T0434-2igqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	6.9911e-31	3bo5A/T0434-3bo5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qpwA	1.4431e-30	2qpwA/T0434-2qpwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r3aA	6.4102e-30	2r3aA/T0434-2r3aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	1.0637e-28	1ml9A/T0434-1ml9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.1
1n6aA	1.2723e-27	1n6aA/T0434-1n6aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1zkkA	1.8794e-27	1zkkA/T0434-1zkkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f69A	3.6047e-27	2f69A/T0434-2f69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
2h21A	4.4360e-13	2h21A/T0434-2h21A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1p0yA	1.3718e-12	1p0yA/T0434-1p0yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1n3jA	1.5473e-08	1n3jA/T0434-1n3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.2
2p52A	7.2567e+00	2p52A/T0434-2p52A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vphA	1.3522e+01	2vphA/T0434-2vphA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pcxA	1.3698e+01	2pcxA/T0434-2pcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2prvA	1.5297e+01	2prvA/T0434-2prvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ag4A	1.5484e+01	2ag4A/T0434-2ag4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.95.1.1
1rutX	1.5653e+01	1rutX/T0434-1rutX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3
1iyeA	1.7712e+01	1iyeA/T0434-1iyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.17.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001