Best Alignments for T0434

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qpwA	7.5864e-27	2qpwA/T0434-2qpwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o8jA	5.5659e-12	2o8jA/T0434-2o8jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igqA	1.2543e-11	2igqA/T0434-2igqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rfiA	1.4428e-11	2rfiA/T0434-2rfiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	6.4146e-11	3bo5A/T0434-3bo5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1n6aA	1.1117e-09	1n6aA/T0434-1n6aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1zkkA	1.7063e-09	1zkkA/T0434-1zkkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	1.2469e-08	1ml9A/T0434-1ml9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.1
2f69A	6.4210e-08	2f69A/T0434-2f69A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1n3jA	1.4582e-07	1n3jA/T0434-1n3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.2
2h21A	9.1154e-01	2h21A/T0434-2h21A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1p0yA	7.8275e+00	1p0yA/T0434-1p0yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1btn	8.0772e+00	1btn/T0434-1btn-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1btnA	9.8846e+00	1btnA/T0434-1btnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.1
2dtcA	1.3190e+01	2dtcA/T0434-2dtcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1btkA	1.3892e+01	1btkA/T0434-1btkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.1
1pls	1.8509e+01	1pls/T0434-1pls-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t92A	1.8791e+01	1t92A/T0434-1t92A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.24.1.3
2ag9A	2.3156e+01	2ag9A/T0434-2ag9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qqgA	2.3701e+01	1qqgA/T0434-1qqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.2 b.55.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001