Best Alignments for T0434

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2rfiA	1.6285e-39	2rfiA/T0434-2rfiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igqA	3.2334e-39	2igqA/T0434-2igqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o8jA	4.2134e-39	2o8jA/T0434-2o8jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	3.8051e-37	3bo5A/T0434-3bo5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	4.7807e-37	1ml9A/T0434-1ml9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.1
2r3aA	8.3143e-37	2r3aA/T0434-2r3aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zkkA	6.4933e-34	1zkkA/T0434-1zkkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qpwA	1.1192e-33	2qpwA/T0434-2qpwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1n6aA	1.6941e-33	1n6aA/T0434-1n6aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
2f69A	3.0431e-33	2f69A/T0434-2f69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
2h21A	3.4384e-16	2h21A/T0434-2h21A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1p0yA	4.2418e-16	1p0yA/T0434-1p0yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
2p52A	3.3888e+00	2p52A/T0434-2p52A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rutX	4.5516e+00	1rutX/T0434-1rutX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3
2prvA	5.0603e+00	2prvA/T0434-2prvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bazA	5.6077e+00	2bazA/T0434-2bazA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m2tB	5.7631e+00	1m2tB/T0434-1m2tB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.42.2.1 b.42.2.1
2pcxA	5.9414e+00	2pcxA/T0434-2pcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iyeA	6.9228e+00	1iyeA/T0434-1iyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.17.1.1
2ag4A	7.1916e+00	2ag4A/T0434-2ag4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.95.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001