Best Alignments for T0434

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2rfiA	3.3706e-38	2rfiA/T0434-2rfiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o8jA	7.2089e-38	2o8jA/T0434-2o8jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igqA	4.9658e-36	2igqA/T0434-2igqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	3.2856e-33	3bo5A/T0434-3bo5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r3aA	5.5783e-32	2r3aA/T0434-2r3aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f69A	2.2990e-29	2f69A/T0434-2f69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1n6aA	2.4229e-29	1n6aA/T0434-1n6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1zkkA	2.6972e-28	1zkkA/T0434-1zkkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qpwA	4.6416e-28	2qpwA/T0434-2qpwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	6.1599e-28	1ml9A/T0434-1ml9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.1
1n3jA	1.5405e-21	1n3jA/T0434-1n3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.2
2h21A	1.1797e-15	2h21A/T0434-2h21A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1p0yA	8.0373e-15	1p0yA/T0434-1p0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
2p52A	3.5248e+00	2p52A/T0434-2p52A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eng	3.6269e+00	2eng/T0434-2eng-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l8fA	3.9452e+00	1l8fA/T0434-1l8fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.52.1.1
2vphA	4.3154e+00	2vphA/T0434-2vphA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pcxA	1.0849e+01	2pcxA/T0434-2pcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ag4A	1.3792e+01	2ag4A/T0434-2ag4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.95.1.1
2engA	1.5248e+01	2engA/T0434-2engA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.52.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001