Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2imgA	1.0439e+01	2imgA/T0429-2imgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ov6A	1.3187e+01	2ov6A/T0429-2ov6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zxuA	1.5942e+01	1zxuA/T0429-1zxuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.23.1.2
2gxaA	2.2011e+01	2gxaA/T0429-2gxaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zzwA	2.4545e+01	1zzwA/T0429-1zzwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1th8A	2.4789e+01	1th8A/T0429-1th8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.122.1.3
2hxpA	2.7401e+01	2hxpA/T0429-2hxpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f5vA	2.9028e+01	2f5vA/T0429-2f5vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.3.1.2 d.16.1.1
2ex4A	3.2077e+01	2ex4A/T0429-2ex4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.42
1wrmA	3.2103e+01	1wrmA/T0429-1wrmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rxdA	3.6774e+01	1rxdA/T0429-1rxdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.45.1.1
2ov0A	3.7335e+01	2ov0A/T0429-2ov0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ptq	3.7869e+01	1ptq/T0429-1ptq-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yz4A	3.8172e+01	1yz4A/T0429-1yz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b4yA	3.9640e+01	2b4yA/T0429-2b4yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
2nt2A	4.5357e+01	2nt2A/T0429-2nt2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i6jA	4.7019e+01	2i6jA/T0429-2i6jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gd1O	4.7531e+01	1gd1O/T0429-1gd1O-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.3 d.81.1.1
1ptqA	4.8730e+01	1ptqA/T0429-1ptqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.49.1.1
2e0tA	5.0158e+01	2e0tA/T0429-2e0tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001