Best Alignments for T0421

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2pbrA	2.4345e-08	2pbrA/T0421-2pbrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p5zB	3.0123e-07	1p5zB/T0421-1p5zB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1gtvA	6.6341e-07	1gtvA/T0421-1gtvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2ccjA	7.7075e-07	2ccjA/T0421-2ccjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kjwA	7.8275e-07	1kjwA/T0421-1kjwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.2.1 c.37.1.1
2qorA	9.5122e-07	2qorA/T0421-2qorA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1znwA	1.2715e-06	1znwA/T0421-1znwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
4tmkA	1.3765e-06	4tmkA/T0421-4tmkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1gky	1.5002e-06	1gky/T0421-1gky-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ex7A	2.0052e-06	1ex7A/T0421-1ex7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2j41A	3.1878e-06	2j41A/T0421-2j41A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kgdA	3.2543e-06	1kgdA/T0421-1kgdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1zm7A	4.6705e-06	1zm7A/T0421-1zm7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vp4A	7.0605e-06	2vp4A/T0421-2vp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z0hA	7.5669e-06	2z0hA/T0421-2z0hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ki9A	8.2121e-06	1ki9A/T0421-1ki9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1khtA	1.4688e-05	1khtA/T0421-1khtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1p6xA	1.5057e-05	1p6xA/T0421-1p6xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1qf9A	2.7058e-05	1qf9A/T0421-1qf9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2plrA	2.7506e-05	2plrA/T0421-2plrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001