# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2f5xA	312	8.624		
2bjrA	368	11.93	b.169.1.1,b.169.1.1	128628,128629
1bupA	386	13.62	c.55.1.1,c.55.1.1	33377,33378
2qxlA	658	14.11		
2opeA	128	14.73		
1g60A	260	16.39	c.66.1.11	70151
1txjA	171	23.07	b.88.1.2	107424
1yz1A	174	23.25	b.88.1.2	124264
2r6iA	284	24.78		
2vbuA	136	28.60		
1v74B	87	32.67	a.24.20.1	100443
1w6uA	302	36.96	c.2.1.2	114288
2dg7A	195	47.79		
2qpqA	301	49.08		
1k0eA	453	53.20	d.161.1.1	67938
1jcfA	344	54.54	c.55.1.1,c.55.1.1	62878,62879
2nrkA	173	55.30		
2zgyA	320	55.74		
2r31A	239	56.59		
2fp4B	395	59.60	c.23.4.1,d.142.1.4	133897,133898
1hc7A	477	61.78	c.51.1.1,d.104.1.1,d.68.5.1	60938,60939,60940
2dt8A	280	62.46		
1o7dA	298	64.43	c.6.2.1	86641
1m1nB	522	66.49	c.92.2.3	78418
1edzA	320	69.32	c.2.1.7,c.58.1.2	30287,33935
2dvzA	314	70.69		
1vrvA	101	72.51		
2p0oA	372	74.57		
1fmbA	104	78.74	b.50.1.1	26777
1ug0A	88	78.85	a.217.1.1	107822
3bxtA	257	79.82		
1l5wA	796	79.98	c.87.1.4	73605
2phzA	311	82.77		
2jmwA	86	86.79		
1t98A	287	87.75	a.4.5.65,a.47.6.1	119196,119197
3cwfA	122	89.02