PFRMAT RR
TARGET T0419
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
KERAKRQPHAAPLVSSLDNRGLLDSLDLGQYLDKDAYKEQLAAEQARLAG
LIRDKRFRQH
241 250 0 8 0.800676
241 251 0 8 0.706637
241 252 0 8 0.694402
241 253 0 8 0.604047
241 254 0 8 0.627468
241 255 0 8 0.523401
241 256 0 8 0.498205
241 257 0 8 0.557726
241 258 0 8 0.429235
241 259 0 8 0.666472
241 260 0 8 0.590832
241 261 0 8 0.463559
241 262 0 8 0.564718
241 263 0 8 0.637748
241 264 0 8 0.503376
241 265 0 8 0.614002
241 266 0 8 0.465705
241 267 0 8 0.487707
241 268 0 8 0.580801
241 269 0 8 0.618811
241 271 0 8 0.561351
241 274 0 8 0.638855
241 275 0 8 0.419799
241 277 0 8 0.547137
241 278 0 8 0.581966
241 279 0 8 0.400178
241 281 0 8 0.526794
241 282 0 8 0.576256
241 283 0 8 0.465494
241 285 0 8 0.539258
241 286 0 8 0.438889
241 288 0 8 0.511001
241 289 0 8 0.493574
241 290 0 8 0.47298
241 292 0 8 0.432401
241 293 0 8 0.437101
241 294 0 8 0.568741
242 251 0 8 0.681004
242 252 0 8 0.659801
242 253 0 8 0.591075
242 254 0 8 0.58779
242 255 0 8 0.499491
242 256 0 8 0.469853
242 257 0 8 0.510792
242 258 0 8 0.394382
242 259 0 8 0.563002
242 260 0 8 0.492563
242 261 0 8 0.416374
242 262 0 8 0.495519
242 263 0 8 0.512049
242 264 0 8 0.420455
242 265 0 8 0.474981
242 267 0 8 0.399369
242 268 0 8 0.47632
242 269 0 8 0.469185
242 271 0 8 0.421084
242 274 0 8 0.408944
243 252 0 8 0.710411
243 253 0 8 0.62784
243 254 0 8 0.635263
243 255 0 8 0.530669
243 256 0 8 0.496501
243 257 0 8 0.546279
243 258 0 8 0.425577
243 259 0 8 0.637462
243 260 0 8 0.558226
243 261 0 8 0.450794
243 262 0 8 0.542914
243 263 0 8 0.594544
243 264 0 8 0.476545
243 265 0 8 0.559937
243 266 0 8 0.432365
243 267 0 8 0.452342
243 268 0 8 0.542422
243 269 0 8 0.561337
243 271 0 8 0.503552
243 274 0 8 0.570202
243 277 0 8 0.475018
243 278 0 8 0.500723
243 281 0 8 0.452029
243 282 0 8 0.50117
243 285 0 8 0.460091
243 288 0 8 0.43413
243 289 0 8 0.414354
243 290 0 8 0.402322
243 293 0 8 0.393291
243 294 0 8 0.516097
244 253 0 8 0.631127
244 254 0 8 0.624954
244 255 0 8 0.527298
244 256 0 8 0.489147
244 257 0 8 0.528648
244 258 0 8 0.415225
244 259 0 8 0.60125
244 260 0 8 0.527829
244 261 0 8 0.43825
244 262 0 8 0.521505
244 263 0 8 0.552713
244 264 0 8 0.452949
244 265 0 8 0.513973
244 266 0 8 0.409194
244 267 0 8 0.42461
244 268 0 8 0.505973
244 269 0 8 0.506989
244 271 0 8 0.451238
244 274 0 8 0.478146
244 277 0 8 0.405825
244 278 0 8 0.428702
244 282 0 8 0.435046
244 285 0 8 0.393578
244 294 0 8 0.443135
245 254 0 8 0.628336
245 255 0 8 0.529478
245 256 0 8 0.492564
245 257 0 8 0.533846
245 258 0 8 0.419007
245 259 0 8 0.61415
245 260 0 8 0.542238
245 261 0 8 0.444566
245 262 0 8 0.531365
245 263 0 8 0.575122
245 264 0 8 0.463414
245 265 0 8 0.540742
245 266 0 8 0.422932
245 267 0 8 0.441135
245 268 0 8 0.52513
245 269 0 8 0.538321
245 271 0 8 0.489392
245 274 0 8 0.540053
245 277 0 8 0.475552
245 278 0 8 0.494475
245 281 0 8 0.453532
245 282 0 8 0.498815
245 285 0 8 0.459404
245 288 0 8 0.434312
245 289 0 8 0.413511
245 290 0 8 0.398312
245 294 0 8 0.491332
246 255 0 8 0.52742
246 256 0 8 0.482447
246 257 0 8 0.504651
246 258 0 8 0.405775
246 259 0 8 0.559024
246 260 0 8 0.49566
246 261 0 8 0.423223
246 262 0 8 0.497026
246 263 0 8 0.513507
246 264 0 8 0.430474
246 265 0 8 0.475183
246 267 0 8 0.400964
246 268 0 8 0.474032
246 269 0 8 0.466615
246 271 0 8 0.423735
246 274 0 8 0.432315
246 277 0 8 0.399132
246 278 0 8 0.409139
246 282 0 8 0.41885
246 294 0 8 0.400785
247 256 0 8 0.525607
247 257 0 8 0.555599
247 258 0 8 0.451827
247 259 0 8 0.678482
247 260 0 8 0.602387
247 261 0 8 0.46656
247 262 0 8 0.553374
247 263 0 8 0.632246
247 264 0 8 0.50665
247 265 0 8 0.605667
247 266 0 8 0.446137
247 267 0 8 0.463266
247 268 0 8 0.548643
247 269 0 8 0.585839
247 271 0 8 0.502653
247 274 0 8 0.610722
247 277 0 8 0.519919
247 278 0 8 0.599881
247 281 0 8 0.497843
247 282 0 8 0.586031
247 283 0 8 0.442176
247 285 0 8 0.52584
247 286 0 8 0.402553
247 288 0 8 0.475483
247 289 0 8 0.488195
247 290 0 8 0.441921
247 292 0 8 0.393029
247 293 0 8 0.403567
247 294 0 8 0.537071
248 257 0 8 0.619303
248 258 0 8 0.496995
248 259 0 8 0.74332
248 260 0 8 0.668087
248 261 0 8 0.519196
248 262 0 8 0.609951
248 263 0 8 0.693534
248 264 0 8 0.561409
248 265 0 8 0.668132
248 266 0 8 0.495662
248 267 0 8 0.504926
248 268 0 8 0.599328
248 269 0 8 0.644419
248 271 0 8 0.546968
248 274 0 8 0.666844
248 275 0 8 0.402486
248 277 0 8 0.548206
248 278 0 8 0.649641
248 281 0 8 0.526082
248 282 0 8 0.628307
248 283 0 8 0.477084
248 285 0 8 0.56342
248 286 0 8 0.435842
248 288 0 8 0.505547
248 289 0 8 0.524163
248 290 0 8 0.470403
248 292 0 8 0.416652
248 293 0 8 0.428713
248 294 0 8 0.567868
249 258 0 8 0.485428
249 259 0 8 0.685902
249 260 0 8 0.615042
249 261 0 8 0.494532
249 262 0 8 0.57399
249 263 0 8 0.6262
249 264 0 8 0.520857
249 265 0 8 0.590239
249 266 0 8 0.454627
249 267 0 8 0.465088
249 268 0 8 0.550658
249 269 0 8 0.562192
249 271 0 8 0.477646
249 274 0 8 0.54637
249 277 0 8 0.472283
249 278 0 8 0.534578
249 281 0 8 0.446749
249 282 0 8 0.528133
249 285 0 8 0.470408
249 288 0 8 0.426156
249 289 0 8 0.435106
249 290 0 8 0.398452
249 294 0 8 0.485949
250 259 0 8 0.854309
250 260 0 8 0.783934
250 261 0 8 0.542175
250 262 0 8 0.653378
250 263 0 8 0.808173
250 264 0 8 0.640827
250 265 0 8 0.801497
250 266 0 8 0.545268
250 267 0 8 0.548863
250 268 0 8 0.664106
250 269 0 8 0.762795
250 271 0 8 0.61252
250 274 0 8 0.791515
250 275 0 8 0.461602
250 277 0 8 0.626154
250 278 0 8 0.802764
250 279 0 8 0.449529
250 281 0 8 0.601403
250 282 0 8 0.765071
250 283 0 8 0.585852
250 285 0 8 0.682645
250 286 0 8 0.536724
250 288 0 8 0.593622
250 289 0 8 0.677504
250 290 0 8 0.563545
250 291 0 8 0.399418
250 292 0 8 0.442626
250 293 0 8 0.4623
250 294 0 8 0.674137
251 260 0 8 0.755207
251 261 0 8 0.585745
251 262 0 8 0.67529
251 263 0 8 0.762049
251 264 0 8 0.628107
251 265 0 8 0.733842
251 266 0 8 0.546274
251 267 0 8 0.546987
251 268 0 8 0.654079
251 269 0 8 0.697663
251 270 0 8 0.395017
251 271 0 8 0.565928
251 274 0 8 0.702891
251 275 0 8 0.403628
251 277 0 8 0.563264
251 278 0 8 0.67919
251 281 0 8 0.532063
251 282 0 8 0.65226
251 283 0 8 0.478011
251 285 0 8 0.579886
251 286 0 8 0.441911
251 288 0 8 0.505794
251 289 0 8 0.541734
251 290 0 8 0.470775
251 292 0 8 0.416318
251 293 0 8 0.437489
251 294 0 8 0.577848
252 261 0 8 0.574704
252 262 0 8 0.672454
252 263 0 8 0.747806
252 264 0 8 0.603621
252 265 0 8 0.710206
252 266 0 8 0.534718
252 267 0 8 0.541534
252 268 0 8 0.654466
252 269 0 8 0.694265
252 271 0 8 0.588994
252 274 0 8 0.717753
252 275 0 8 0.417494
252 277 0 8 0.58026
252 278 0 8 0.644031
252 281 0 8 0.546094
252 282 0 8 0.623839
252 283 0 8 0.46635
252 285 0 8 0.569061
252 286 0 8 0.434625
252 288 0 8 0.512331
252 289 0 8 0.507682
252 290 0 8 0.469274
252 292 0 8 0.422569
252 293 0 8 0.437401
252 294 0 8 0.579126
253 262 0 8 0.590909
253 263 0 8 0.615081
253 264 0 8 0.508093
253 265 0 8 0.560462
253 266 0 8 0.443014
253 267 0 8 0.449268
253 268 0 8 0.552426
253 269 0 8 0.540257
253 271 0 8 0.460833
253 274 0 8 0.487538
253 277 0 8 0.403928
253 278 0 8 0.396407
253 282 0 8 0.40126
253 294 0 8 0.411782
254 263 0 8 0.726735
254 264 0 8 0.566197
254 265 0 8 0.688638
254 266 0 8 0.495385
254 267 0 8 0.501509
254 268 0 8 0.62645
254 269 0 8 0.676123
254 271 0 8 0.56922
254 274 0 8 0.707227
254 277 0 8 0.556345
254 278 0 8 0.61431
254 281 0 8 0.518343
254 282 0 8 0.593442
254 283 0 8 0.426455
254 285 0 8 0.536438
254 286 0 8 0.394352
254 288 0 8 0.468693
254 289 0 8 0.472279
254 290 0 8 0.437037
254 293 0 8 0.408091
254 294 0 8 0.551802
255 264 0 8 0.535945
255 265 0 8 0.603709
255 266 0 8 0.468283
255 267 0 8 0.471032
255 268 0 8 0.590778
255 269 0 8 0.589891
255 271 0 8 0.500217
255 274 0 8 0.544636
255 277 0 8 0.428661
255 278 0 8 0.412229
255 282 0 8 0.414117
255 294 0 8 0.418124
256 265 0 8 0.575586
256 266 0 8 0.444715
256 267 0 8 0.449149
256 268 0 8 0.569719
256 269 0 8 0.566447
256 271 0 8 0.489478
256 274 0 8 0.527508
256 277 0 8 0.422465
256 282 0 8 0.396193
256 294 0 8 0.401845
257 266 0 8 0.514962
257 267 0 8 0.524199
257 268 0 8 0.660866
257 269 0 8 0.696827
257 271 0 8 0.611297
257 273 0 8 0.406643
257 274 0 8 0.717455
257 277 0 8 0.56971
257 278 0 8 0.565782
257 281 0 8 0.522354
257 282 0 8 0.553258
257 283 0 8 0.39755
257 285 0 8 0.511277
257 288 0 8 0.435696
257 289 0 8 0.419629
257 290 0 8 0.410319
257 293 0 8 0.399942
257 294 0 8 0.53633
258 268 0 8 0.494892
258 269 0 8 0.458464
259 268 0 8 0.701784
259 269 0 8 0.786766
259 271 0 8 0.637616
259 273 0 8 0.410087
259 274 0 8 0.794964
259 275 0 8 0.401506
259 277 0 8 0.581071
259 278 0 8 0.737172
259 281 0 8 0.537987
259 282 0 8 0.694361
259 283 0 8 0.473997
259 285 0 8 0.603831
259 286 0 8 0.423889
259 288 0 8 0.476739
259 289 0 8 0.56529
259 290 0 8 0.465569
259 293 0 8 0.396325
259 294 0 8 0.623398
260 269 0 8 0.847795
260 270 0 8 0.41152
260 271 0 8 0.711729
260 273 0 8 0.495054
260 274 0 8 0.847357
260 275 0 8 0.492573
260 277 0 8 0.633985
260 278 0 8 0.783435
260 279 0 8 0.396593
260 281 0 8 0.589181
260 282 0 8 0.740284
260 283 0 8 0.528053
260 285 0 8 0.654822
260 286 0 8 0.478578
260 288 0 8 0.531058
260 289 0 8 0.611026
260 290 0 8 0.516825
260 292 0 8 0.422044
260 293 0 8 0.456445
260 294 0 8 0.67932
261 271 0 8 0.544416
261 274 0 8 0.586142
261 277 0 8 0.426647
261 278 0 8 0.434419
261 282 0 8 0.421047
261 294 0 8 0.436519
262 271 0 8 0.513148
262 274 0 8 0.599027
262 277 0 8 0.455272
262 278 0 8 0.486538
262 281 0 8 0.418726
262 282 0 8 0.46849
262 285 0 8 0.418295
262 294 0 8 0.438315
263 273 0 8 0.462006
263 274 0 8 0.842276
263 275 0 8 0.492572
263 277 0 8 0.650647
263 278 0 8 0.78104
263 279 0 8 0.421651
263 281 0 8 0.608695
263 282 0 8 0.737228
263 283 0 8 0.54474
263 285 0 8 0.661445
263 286 0 8 0.498279
263 288 0 8 0.549678
263 289 0 8 0.618591
263 290 0 8 0.530735
263 292 0 8 0.416875
263 293 0 8 0.441972
263 294 0 8 0.675174
264 273 0 8 0.416179
264 274 0 8 0.723172
264 277 0 8 0.510109
264 278 0 8 0.608067
264 281 0 8 0.461328
264 282 0 8 0.567293
264 285 0 8 0.491313
264 288 0 8 0.398585
264 289 0 8 0.43138
264 294 0 8 0.513129
265 274 0 8 0.899742
265 275 0 8 0.608327
265 277 0 8 0.735791
265 278 0 8 0.848723
265 279 0 8 0.512047
265 281 0 8 0.690173
265 282 0 8 0.809687
265 283 0 8 0.634875
265 284 0 8 0.416255
265 285 0 8 0.741497
265 286 0 8 0.587834
265 288 0 8 0.630995
265 289 0 8 0.712647
265 290 0 8 0.619608
265 291 0 8 0.420047
265 292 0 8 0.485469
265 293 0 8 0.514355
265 294 0 8 0.75644
266 275 0 8 0.454189
266 277 0 8 0.606246
266 278 0 8 0.658725
266 281 0 8 0.552096
266 282 0 8 0.617497
266 283 0 8 0.43685
266 285 0 8 0.557605
266 286 0 8 0.407257
266 288 0 8 0.464158
266 289 0 8 0.46484
266 290 0 8 0.439228
266 292 0 8 0.402441
266 293 0 8 0.420999
266 294 0 8 0.581105
267 277 0 8 0.526898
267 278 0 8 0.553716
267 281 0 8 0.472705
267 282 0 8 0.519186
267 285 0 8 0.463516
267 288 0 8 0.393741
267 294 0 8 0.496759
268 277 0 8 0.584502
268 278 0 8 0.640213
268 281 0 8 0.530233
268 282 0 8 0.594518
268 283 0 8 0.41959
268 285 0 8 0.532969
268 288 0 8 0.436429
268 289 0 8 0.438889
268 290 0 8 0.408294
268 294 0 8 0.537771
269 278 0 8 0.804848
269 279 0 8 0.48692
269 281 0 8 0.663035
269 282 0 8 0.756521
269 283 0 8 0.585295
269 285 0 8 0.692453
269 286 0 8 0.538729
269 288 0 8 0.580975
269 289 0 8 0.619385
269 290 0 8 0.554282
269 292 0 8 0.440423
269 293 0 8 0.457882
269 294 0 8 0.696194
271 281 0 8 0.695476
271 282 0 8 0.756161
271 283 0 8 0.604084
271 284 0 8 0.461187
271 285 0 8 0.706191
271 286 0 8 0.577079
271 288 0 8 0.616794
271 289 0 8 0.598037
271 290 0 8 0.572972
271 291 0 8 0.443754
271 292 0 8 0.536283
271 293 0 8 0.536999
271 294 0 8 0.689575
274 283 0 8 0.708011
274 284 0 8 0.495696
274 285 0 8 0.791214
274 286 0 8 0.676451
274 288 0 8 0.678495
274 289 0 8 0.688368
274 290 0 8 0.632611
274 291 0 8 0.427486
274 292 0 8 0.516021
274 293 0 8 0.514187
274 294 0 8 0.747913
275 284 0 8 0.423082
275 285 0 8 0.695326
275 286 0 8 0.573798
275 288 0 8 0.594388
275 289 0 8 0.560608
275 290 0 8 0.538383
275 292 0 8 0.473472
275 293 0 8 0.451827
275 294 0 8 0.654554
277 286 0 8 0.474233
277 288 0 8 0.447993
277 289 0 8 0.41006
277 294 0 8 0.449381
278 288 0 8 0.739662
278 289 0 8 0.773739
278 290 0 8 0.704585
278 291 0 8 0.465123
278 292 0 8 0.555587
278 293 0 8 0.544663
278 294 0 8 0.798097
279 288 0 8 0.676433
279 289 0 8 0.646505
279 290 0 8 0.627356
279 291 0 8 0.463799
279 292 0 8 0.54935
279 293 0 8 0.515219
279 294 0 8 0.739217
281 290 0 8 0.448038
281 294 0 8 0.536896
282 291 0 8 0.487719
282 292 0 8 0.574365
282 293 0 8 0.56185
282 294 0 8 0.807624
283 292 0 8 0.617398
283 293 0 8 0.592558
283 294 0 8 0.818461
284 294 0 8 0.508175
285 294 0 8 0.765316
END