PFRMAT RR
TARGET T0419
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
KERAKRQPHAAPLVSSLDNRGLLDSLDLGQYLDKDAYKEQLAAEQARLAG
LIRDKRFRQH
240 250 0 8 0.500835
240 251 0 8 0.464046
240 268 0 8 0.542089
241 250 0 8 0.751337
241 251 0 8 0.718102
241 252 0 8 0.668272
241 253 0 8 0.617168
241 254 0 8 0.633939
241 255 0 8 0.471579
241 256 0 8 0.531328
241 257 0 8 0.491129
241 258 0 8 0.460775
241 259 0 8 0.587051
241 260 0 8 0.520695
241 262 0 8 0.466173
241 263 0 8 0.526666
241 265 0 8 0.550945
241 266 0 8 0.43838
241 268 0 8 0.689879
241 269 0 8 0.571361
241 274 0 8 0.576187
241 278 0 8 0.546162
241 285 0 8 0.426685
241 289 0 8 0.560163
241 294 0 8 0.603027
242 251 0 8 0.718159
242 252 0 8 0.650092
242 253 0 8 0.766804
242 254 0 8 0.615341
242 255 0 8 0.517763
242 256 0 8 0.487116
242 257 0 8 0.600487
242 259 0 8 0.58477
242 260 0 8 0.477243
242 263 0 8 0.470039
242 265 0 8 0.47331
242 268 0 8 0.560584
242 269 0 8 0.51175
242 274 0 8 0.504541
242 278 0 8 0.451035
242 289 0 8 0.454559
242 294 0 8 0.482004
243 252 0 8 0.703477
243 253 0 8 0.659111
243 254 0 8 0.656306
243 255 0 8 0.547447
243 256 0 8 0.532674
243 257 0 8 0.496266
243 259 0 8 0.595665
243 260 0 8 0.546015
243 262 0 8 0.458071
243 263 0 8 0.549353
243 264 0 8 0.443511
243 265 0 8 0.606371
243 268 0 8 0.625107
243 269 0 8 0.597269
243 274 0 8 0.608793
243 278 0 8 0.560674
243 288 0 8 0.478408
243 289 0 8 0.510869
243 294 0 8 0.721935
244 253 0 8 0.658678
244 254 0 8 0.652733
244 255 0 8 0.560013
244 257 0 8 0.519268
244 258 0 8 0.431232
244 259 0 8 0.637601
244 260 0 8 0.528783
244 262 0 8 0.443928
244 263 0 8 0.529654
244 264 0 8 0.433052
244 265 0 8 0.501649
244 268 0 8 0.49149
244 269 0 8 0.570203
244 271 0 8 0.446323
244 274 0 8 0.588987
244 278 0 8 0.540508
244 281 0 8 0.490897
244 282 0 8 0.473407
244 288 0 8 0.463849
244 289 0 8 0.528703
244 294 0 8 0.434557
244 295 0 8 0.456441
245 254 0 8 0.677617
245 255 0 8 0.619939
245 256 0 8 0.484223
245 257 0 8 0.471696
245 259 0 8 0.600732
245 260 0 8 0.588291
245 262 0 8 0.479367
245 263 0 8 0.587842
245 264 0 8 0.498366
245 265 0 8 0.650514
245 267 0 8 0.576901
245 268 0 8 0.53899
245 269 0 8 0.621899
245 271 0 8 0.489822
245 274 0 8 0.638055
245 277 0 8 0.439303
245 278 0 8 0.56788
245 279 0 8 0.494909
245 282 0 8 0.496303
245 288 0 8 0.505993
245 289 0 8 0.449734
245 294 0 8 0.551961
246 255 0 8 0.582042
246 256 0 8 0.525682
246 257 0 8 0.506005
246 258 0 8 0.43316
246 259 0 8 0.60535
246 260 0 8 0.508554
246 261 0 8 0.460775
246 262 0 8 0.539034
246 263 0 8 0.498076
246 264 0 8 0.429726
246 265 0 8 0.556807
246 268 0 8 0.624956
246 269 0 8 0.529587
246 274 0 8 0.554668
246 278 0 8 0.486945
246 289 0 8 0.489583
246 294 0 8 0.473756
247 256 0 8 0.568554
247 257 0 8 0.564516
247 258 0 8 0.480764
247 259 0 8 0.73073
247 260 0 8 0.682206
247 261 0 8 0.428307
247 262 0 8 0.524036
247 263 0 8 0.688965
247 264 0 8 0.59058
247 265 0 8 0.682013
247 266 0 8 0.493935
247 267 0 8 0.554615
247 268 0 8 0.636684
247 269 0 8 0.711452
247 271 0 8 0.562277
247 273 0 8 0.458688
247 274 0 8 0.723977
247 275 0 8 0.455002
247 277 0 8 0.521972
247 278 0 8 0.686922
247 279 0 8 0.499233
247 281 0 8 0.507751
247 282 0 8 0.616775
247 283 0 8 0.448103
247 285 0 8 0.523705
247 286 0 8 0.428391
247 288 0 8 0.489806
247 289 0 8 0.566333
247 290 0 8 0.504263
247 292 0 8 0.466554
247 293 0 8 0.451593
247 294 0 8 0.804206
248 257 0 8 0.651843
248 258 0 8 0.599716
248 259 0 8 0.819866
248 260 0 8 0.73549
248 261 0 8 0.506883
248 262 0 8 0.601711
248 263 0 8 0.741924
248 264 0 8 0.651522
248 265 0 8 0.685077
248 266 0 8 0.503205
248 267 0 8 0.494664
248 268 0 8 0.647092
248 269 0 8 0.745939
248 270 0 8 0.514953
248 271 0 8 0.599567
248 274 0 8 0.743005
248 275 0 8 0.456276
248 277 0 8 0.526189
248 278 0 8 0.697252
248 281 0 8 0.607688
248 282 0 8 0.626118
248 283 0 8 0.4534
248 285 0 8 0.506355
248 286 0 8 0.469759
248 288 0 8 0.611406
248 289 0 8 0.690678
248 290 0 8 0.521453
248 292 0 8 0.448317
248 293 0 8 0.481526
248 294 0 8 0.597166
248 295 0 8 0.627064
249 258 0 8 0.467754
249 259 0 8 0.737029
249 260 0 8 0.746486
249 261 0 8 0.475745
249 262 0 8 0.533539
249 263 0 8 0.748328
249 264 0 8 0.669133
249 265 0 8 0.672622
249 266 0 8 0.480721
249 267 0 8 0.461375
249 268 0 8 0.532346
249 269 0 8 0.751895
249 271 0 8 0.593428
249 274 0 8 0.777482
249 277 0 8 0.554183
249 278 0 8 0.728788
249 281 0 8 0.454418
249 282 0 8 0.655538
249 283 0 8 0.460625
249 285 0 8 0.53265
249 290 0 8 0.632438
249 291 0 8 0.470016
249 293 0 8 0.567668
249 294 0 8 0.518694
250 259 0 8 0.908361
250 260 0 8 0.839014
250 261 0 8 0.663786
250 262 0 8 0.74824
250 263 0 8 0.84734
250 264 0 8 0.773632
250 265 0 8 0.837185
250 266 0 8 0.629439
250 267 0 8 0.601044
250 268 0 8 0.708272
250 269 0 8 0.843582
250 270 0 8 0.494437
250 271 0 8 0.684766
250 273 0 8 0.483836
250 274 0 8 0.820459
250 275 0 8 0.639958
250 276 0 8 0.434923
250 277 0 8 0.651848
250 278 0 8 0.829665
250 279 0 8 0.505799
250 281 0 8 0.754188
250 282 0 8 0.777269
250 283 0 8 0.629473
250 284 0 8 0.472127
250 285 0 8 0.669261
250 286 0 8 0.579234
250 288 0 8 0.638395
250 289 0 8 0.713514
250 290 0 8 0.6539
250 291 0 8 0.46739
250 292 0 8 0.595284
250 293 0 8 0.577178
250 294 0 8 0.709717
250 295 0 8 0.567315
251 260 0 8 0.741852
251 261 0 8 0.55293
251 262 0 8 0.645603
251 263 0 8 0.738597
251 265 0 8 0.758946
251 266 0 8 0.590788
251 267 0 8 0.573204
251 268 0 8 0.775074
251 269 0 8 0.738463
251 273 0 8 0.471333
251 274 0 8 0.727369
251 275 0 8 0.451383
251 278 0 8 0.675388
251 279 0 8 0.452066
251 281 0 8 0.484022
251 285 0 8 0.481157
251 286 0 8 0.434379
251 288 0 8 0.536644
251 289 0 8 0.65628
251 290 0 8 0.473908
251 293 0 8 0.436248
251 294 0 8 0.777539
252 261 0 8 0.513615
252 262 0 8 0.602267
252 263 0 8 0.709729
252 264 0 8 0.609955
252 265 0 8 0.684275
252 266 0 8 0.699237
252 267 0 8 0.480831
252 268 0 8 0.759823
252 269 0 8 0.709856
252 273 0 8 0.576769
252 274 0 8 0.713092
252 275 0 8 0.43719
252 277 0 8 0.48537
252 278 0 8 0.640627
252 281 0 8 0.464319
252 282 0 8 0.567065
252 285 0 8 0.455299
252 288 0 8 0.511345
252 289 0 8 0.656291
252 290 0 8 0.435376
252 294 0 8 0.631112
253 262 0 8 0.502096
253 263 0 8 0.568581
253 265 0 8 0.5529
253 266 0 8 0.453555
253 268 0 8 0.595172
253 269 0 8 0.568025
253 274 0 8 0.584842
253 278 0 8 0.476226
253 289 0 8 0.492644
253 292 0 8 0.449417
253 294 0 8 0.494527
254 263 0 8 0.688687
254 264 0 8 0.581082
254 265 0 8 0.698628
254 266 0 8 0.578451
254 267 0 8 0.496024
254 268 0 8 0.640198
254 269 0 8 0.699292
254 271 0 8 0.548963
254 273 0 8 0.480158
254 274 0 8 0.711255
254 277 0 8 0.515113
254 278 0 8 0.657347
254 279 0 8 0.427123
254 281 0 8 0.535306
254 282 0 8 0.5936
254 283 0 8 0.431745
254 285 0 8 0.497276
254 286 0 8 0.434179
254 288 0 8 0.619029
254 289 0 8 0.580902
254 290 0 8 0.451471
254 294 0 8 0.5876
254 295 0 8 0.447787
255 264 0 8 0.528078
255 265 0 8 0.622167
255 266 0 8 0.435733
255 267 0 8 0.451276
255 268 0 8 0.495899
255 269 0 8 0.625983
255 271 0 8 0.492957
255 274 0 8 0.640479
255 277 0 8 0.437237
255 278 0 8 0.545349
255 281 0 8 0.438772
255 282 0 8 0.482699
255 288 0 8 0.541696
255 289 0 8 0.460981
255 294 0 8 0.475023
256 265 0 8 0.583374
256 268 0 8 0.560621
256 269 0 8 0.527528
256 273 0 8 0.46114
256 274 0 8 0.548812
256 278 0 8 0.466325
256 289 0 8 0.437535
256 294 0 8 0.454199
257 266 0 8 0.539034
257 268 0 8 0.599427
257 269 0 8 0.629261
257 271 0 8 0.51385
257 274 0 8 0.640901
257 275 0 8 0.464907
257 276 0 8 0.440992
257 277 0 8 0.472756
257 278 0 8 0.578716
257 281 0 8 0.592171
257 282 0 8 0.516573
257 285 0 8 0.433378
257 286 0 8 0.538834
257 288 0 8 0.465415
257 289 0 8 0.499486
257 292 0 8 0.444891
257 294 0 8 0.528856
258 268 0 8 0.501915
258 269 0 8 0.46182
258 274 0 8 0.464505
258 289 0 8 0.644989
259 268 0 8 0.686696
259 269 0 8 0.814703
259 270 0 8 0.460077
259 271 0 8 0.664502
259 273 0 8 0.492295
259 274 0 8 0.789253
259 275 0 8 0.624745
259 276 0 8 0.445362
259 277 0 8 0.645431
259 278 0 8 0.790908
259 279 0 8 0.480362
259 281 0 8 0.749192
259 282 0 8 0.739049
259 283 0 8 0.602862
259 284 0 8 0.462582
259 285 0 8 0.63513
259 286 0 8 0.547177
259 288 0 8 0.575168
259 289 0 8 0.671882
259 290 0 8 0.594168
259 291 0 8 0.426902
259 292 0 8 0.542644
259 293 0 8 0.543235
259 294 0 8 0.686213
259 295 0 8 0.504847
260 269 0 8 0.852081
260 271 0 8 0.773204
260 273 0 8 0.505145
260 274 0 8 0.836256
260 275 0 8 0.52288
260 277 0 8 0.712927
260 278 0 8 0.833633
260 279 0 8 0.467047
260 281 0 8 0.596958
260 282 0 8 0.782364
260 283 0 8 0.660238
260 284 0 8 0.524711
260 285 0 8 0.681508
260 286 0 8 0.552922
260 288 0 8 0.553045
260 289 0 8 0.575647
260 290 0 8 0.686125
260 291 0 8 0.532088
260 292 0 8 0.451923
260 293 0 8 0.648129
260 294 0 8 0.66481
260 295 0 8 0.427276
261 271 0 8 0.512599
261 274 0 8 0.678048
261 277 0 8 0.452817
261 278 0 8 0.591242
261 281 0 8 0.497319
261 282 0 8 0.51137
261 294 0 8 0.455881
262 271 0 8 0.535914
262 274 0 8 0.714486
262 277 0 8 0.499136
262 278 0 8 0.643592
262 281 0 8 0.551984
262 282 0 8 0.568755
262 285 0 8 0.475789
262 289 0 8 0.476199
262 290 0 8 0.43033
262 294 0 8 0.507058
263 273 0 8 0.539012
263 274 0 8 0.827774
263 275 0 8 0.571514
263 277 0 8 0.690673
263 278 0 8 0.837788
263 279 0 8 0.531221
263 281 0 8 0.645404
263 282 0 8 0.785225
263 283 0 8 0.660381
263 284 0 8 0.512312
263 285 0 8 0.679757
263 286 0 8 0.590277
263 288 0 8 0.596623
263 289 0 8 0.61847
263 290 0 8 0.664004
263 291 0 8 0.488954
263 292 0 8 0.455461
263 293 0 8 0.613008
263 294 0 8 0.686637
264 273 0 8 0.448358
264 274 0 8 0.8052
264 275 0 8 0.445924
264 277 0 8 0.624855
264 278 0 8 0.772231
264 281 0 8 0.555552
264 282 0 8 0.711215
264 283 0 8 0.556221
264 285 0 8 0.591215
264 286 0 8 0.467799
264 288 0 8 0.479572
264 289 0 8 0.487614
264 290 0 8 0.565941
264 293 0 8 0.504712
264 294 0 8 0.577754
265 274 0 8 0.862852
265 275 0 8 0.642459
265 276 0 8 0.431277
265 277 0 8 0.750285
265 278 0 8 0.873279
265 279 0 8 0.648415
265 281 0 8 0.716177
265 282 0 8 0.831408
265 283 0 8 0.719019
265 284 0 8 0.571897
265 285 0 8 0.741813
265 286 0 8 0.724999
265 288 0 8 0.659102
265 289 0 8 0.682407
265 290 0 8 0.71285
265 291 0 8 0.527583
265 292 0 8 0.515503
265 293 0 8 0.64989
265 294 0 8 0.767747
265 295 0 8 0.490307
266 275 0 8 0.557999
266 277 0 8 0.579299
266 278 0 8 0.683695
266 281 0 8 0.542915
266 282 0 8 0.613438
266 283 0 8 0.445201
266 285 0 8 0.497325
266 286 0 8 0.470854
266 288 0 8 0.450812
266 289 0 8 0.53621
266 290 0 8 0.462927
266 293 0 8 0.442134
266 294 0 8 0.582691
267 277 0 8 0.555007
267 278 0 8 0.678486
267 279 0 8 0.481188
267 281 0 8 0.472373
267 282 0 8 0.602064
267 285 0 8 0.481425
267 288 0 8 0.475799
267 290 0 8 0.4364
267 294 0 8 0.62619
268 278 0 8 0.677971
268 281 0 8 0.516544
268 283 0 8 0.435385
268 285 0 8 0.485864
268 286 0 8 0.441679
268 288 0 8 0.437031
268 289 0 8 0.67287
268 292 0 8 0.431189
268 294 0 8 0.652857
269 278 0 8 0.815594
269 279 0 8 0.526918
269 281 0 8 0.634806
269 282 0 8 0.754216
269 283 0 8 0.630139
269 284 0 8 0.487632
269 285 0 8 0.65514
269 286 0 8 0.568546
269 288 0 8 0.567801
269 289 0 8 0.584948
269 290 0 8 0.622674
269 291 0 8 0.51566
269 292 0 8 0.447191
269 293 0 8 0.643113
269 294 0 8 0.669621
270 289 0 8 0.439569
271 281 0 8 0.765586
271 282 0 8 0.883311
271 283 0 8 0.850051
271 284 0 8 0.624411
271 285 0 8 0.776131
271 286 0 8 0.694613
271 288 0 8 0.678307
271 289 0 8 0.659216
271 290 0 8 0.708339
271 291 0 8 0.516533
271 292 0 8 0.485971
271 293 0 8 0.639269
271 294 0 8 0.668054
274 283 0 8 0.700996
274 284 0 8 0.562105
274 285 0 8 0.718863
274 286 0 8 0.607871
274 288 0 8 0.555675
274 289 0 8 0.579058
274 290 0 8 0.650317
274 291 0 8 0.4676
274 292 0 8 0.425826
274 293 0 8 0.590513
274 294 0 8 0.621795
275 285 0 8 0.514824
275 286 0 8 0.504355
275 288 0 8 0.431251
275 289 0 8 0.62907
275 290 0 8 0.446078
275 294 0 8 0.624412
276 286 0 8 0.437378
277 286 0 8 0.51808
277 288 0 8 0.488905
277 289 0 8 0.478689
277 290 0 8 0.666711
277 291 0 8 0.473311
277 293 0 8 0.57843
277 294 0 8 0.51769
278 287 0 8 0.425663
278 288 0 8 0.717045
278 289 0 8 0.761858
278 290 0 8 0.817101
278 291 0 8 0.63269
278 292 0 8 0.531111
278 293 0 8 0.719231
278 294 0 8 0.769223
278 295 0 8 0.480102
279 288 0 8 0.610328
279 289 0 8 0.594835
279 290 0 8 0.565382
279 292 0 8 0.447444
279 293 0 8 0.512777
279 294 0 8 0.76826
280 294 0 8 0.549144
281 290 0 8 0.528528
281 292 0 8 0.453785
281 293 0 8 0.457431
281 294 0 8 0.598636
282 291 0 8 0.552945
282 292 0 8 0.532289
282 293 0 8 0.651918
282 294 0 8 0.766306
282 295 0 8 0.478486
283 292 0 8 0.48858
283 293 0 8 0.63589
283 294 0 8 0.743787
283 295 0 8 0.431921
284 293 0 8 0.469262
284 294 0 8 0.561937
285 294 0 8 0.73531
286 295 0 8 0.4539
END