Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hnhA	1.4692e-17	2hnhA/T0407-2hnhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m65A	6.4724e-17	1m65A/T0407-1m65A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2yxoA	9.5610e-16	2yxoA/T0407-2yxoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2anuA	2.6344e-15	2anuA/T0407-2anuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
1v77A	1.7800e-03	1v77A/T0407-1v77A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.2
2gzxA	8.3361e-01	2gzxA/T0407-2gzxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qahA	1.2086e+00	2qahA/T0407-2qahA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yixA	1.4948e+00	1yixA/T0407-1yixA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
2ffiA	1.5061e+00	2ffiA/T0407-2ffiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
2qulA	1.5563e+00	2qulA/T0407-2qulA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j6oA	1.7555e+00	1j6oA/T0407-1j6oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
3c86A	1.7811e+00	3c86A/T0407-3c86A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zzmA	1.9237e+00	1zzmA/T0407-1zzmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
2pgfA	2.3149e+00	2pgfA/T0407-2pgfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bf6A	2.4659e+00	1bf6A/T0407-1bf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.3
2ob3A	2.5630e+00	2ob3A/T0407-2ob3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xwyA	2.8210e+00	1xwyA/T0407-1xwyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
2q02A	2.9583e+00	2q02A/T0407-2q02A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f6kA	3.0487e+00	2f6kA/T0407-2f6kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
1vflA	3.4468e+00	1vflA/T0407-1vflA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001