Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2anuA	8.3145e-17	2anuA/T0407-2anuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
1m65A	1.1166e-15	1m65A/T0407-1m65A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2yxoA	2.8529e-14	2yxoA/T0407-2yxoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hnhA	3.9642e-08	2hnhA/T0407-2hnhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qulA	1.6798e+00	2qulA/T0407-2qulA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pgfA	1.9443e+00	2pgfA/T0407-2pgfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nzlA	2.2893e+00	2nzlA/T0407-2nzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i60A	2.7802e+00	1i60A/T0407-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.4
1w1iE	3.2139e+00	1w1iE/T0407-1w1iE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
1ltdA	3.8468e+00	1ltdA/T0407-1ltdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.4.1 d.120.1.1
2rduA	4.7977e+00	2rduA/T0407-2rduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fkx	5.1630e+00	1fkx/T0407-1fkx-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vflA	5.4944e+00	1vflA/T0407-1vflA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
2q02A	6.0504e+00	2q02A/T0407-2q02A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2amxA	7.0692e+00	2amxA/T0407-2amxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
1a4mA	8.1196e+00	1a4mA/T0407-1a4mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
1gw9A	8.7567e+00	1gw9A/T0407-1gw9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.3
2g0wA	8.9604e+00	2g0wA/T0407-2g0wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.4
1gkpA	1.0004e+01	1gkpA/T0407-1gkpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.92.1.3 c.1.9.6
2hk0A	1.0071e+01	2hk0A/T0407-2hk0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001